| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6727 |
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| Symbol | |
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| ID | 8362918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8421021 |
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| End bp | 8424350 |
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| Gene Length | 3330 bp |
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| Protein Length | 1109 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644968859 |
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| Product | ASPIC/UnbV domain protein |
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| Protein accession | YP_003126329 |
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| Protein GI | 256425676 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000293093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAGCT ATTCCACAGC AATACACCAA TGCAGTCCAC GCTCCGCAGT CAGACCAGGT
ATTTTTCTTA CACTGTTACT CACACTCCGT GTTTCAGCCG CCATTGCTCA GCAGCCTTTG
TTTCAGCAGT TACCAGTAAA AACTACCAAC ATTAAATTCA GCAATACATT GAATGAAACC
GAAAAGTTCA ATGTGCTGGC ATATGAATAC TTCTATAATG GGGGAGGTGT TGCTGTTGGC
GATATCAATA ACGATGGTTT ACAGGATCTG TTCTTTACTG CCAATATGGG ACCTGATAAG
CTTTACCTGA ACAAAGGCAA TATGGTCTTT TCAGATATTA CCCGCAATGC TGCCAAAGAC
CTGGAAGGCA GACCTGAAGG ATGGAAAACA GGGGTGACCA TGGCAGATGT GAATGGGGAC
GGATTACTGG ATATTTATGT TTGTTATTCC GGTAAAAAGA GCGATGAACT ACGCAGAAAC
CAGCTGTTTA TTAACCTGGG GAACGCGAAA TTCGCAGAGA AAGCCAAAGA ATATGGGCTC
GATGATCCCG GCTATAGTAC GAACGCCGTC TTCTTTGACT ATGATAATGA TGGCGATCTT
GACATGTTTC TGTTGAATCA TAATGTGATC AAGATCGATA ATATGGAGTT TGCCAGGTAC
AAAAATGAAA CAGATCCCCT GGCAGGTAAT AAGCTATACC GCAACGATAA TAACCACTTT
ACGGAAGTCA GTAAACAGGC GGGTATCATA CAAAACCCAC TGACTTTCGG ATTGGGGGTA
GCTATTGCTG ACATCAACCA GGATGGCTGG CAGGACATTT ATGTCACCAA CGATTACAAT
GAACGCGATT ACCTCTATAT AAATAAACAC GACGGCACCT TTGCAGAAGA TGCTACCAAC
TGTTTCAGTC ACCTGTCTCA CTTTTCTATG GGTGTTGACA TTGCTGACTT TAACAATGAC
GCACTGCCGG ATGTCATGAC CCTGGATATG TTGCCGGAAG ATAACCAGCG ACAGAAGTTG
TTACAGCTGC AGGAGAATTA TGAGTCTTTT GAACTGATGA TTTCCCAGGA TCTGTATAAG
CAGTACATGC GTAATATGCT GCAACTGAAT AATGGGGATG GGACTTTCAG TGAAATAGGA
CAACTGGCCG GTGTGTCGAA TACAGACTGG AGCTGGTGCC CCCTGATAGC AGACCTGGAC
AATGACGGGT ATAAGGATAT TCTTGTCACC AATGGTTATC TCAGAGATTA TACCAATAAG
GATTTCCTGC GCTACTGGGG TGACTATAAA GTAAAGAAGG CGATTGACAG AGAGCCTGTT
CTCCTGATGG ACCTGGTATC GGCAATGCCC TCAACTTCTT TGCAGAATTA TGTGTTCCGT
AATAATAAAG ACCTCACCTT TTCCAATATG CAGCAAAAAT GGGGATTTGA TGCCGGTGGG
ATTTCCAGTG GCGCTGTCTA TGCTGATCTG GATAATGATG GTGATCTTGA TCTGGTGATC
AATAAGATCA ATGAACCGGC TGCGGTGTAT CAGAATATGA GCCGTGAACA GGGCAAGGCC
GCTGCTTATC TTTCCCTGCA ACTGAAAGGG GCGGGTATGA ATACGGTTGC CGTAGGCGCC
AAAGTATATG TATACAATAA GGGAAATATC CAGTATCAGG AAGTCAATCC TAACCGTGGT
TATCTTTCTG CGGTCTCTAC CCGTTTGCTG TTTGGATTGG GGGATAACAC ACAGGTGGAT
TCTGTACGGA TCATCTGGCC TGATAACAAG GTACAGCGCC TGACAAATGT AGCTGCCAAT
CAATTGCTGA CAGTTGCTTA TGCGCCGGAT GCAAGTTTAC CCGCATCACA TAAGACAATG
CCCGGCTGGT TCCGTAACGC GGACAGTCTC TTTACTTATA GGCACAGCGA TATTTCTGAG
AATGACTTCA AGCGTCAGTT GCTGATGATG TTCATGTACT CCAGGACAGG TCCCGTGTTT
GAAAAGGCGG ATGTAAATAA AGATGGTCTT GAAGACCTGT ACATCGCGGG AGATCATGAA
CAGGCTGCTG CCATTTACCT GCAGAAAGCA GGTGGTGGTT TTACGCAGGG TACTAAAATC
GTGTCAGGAA CGGAGGTGGC TTCCCAGGTA GCGGCCGCCG CCTTTTTTGA TGCAAATGGT
GACGGGGCTC CTGATCTTTA CGTAGCAAAA GGCGGTTATA GCCTTTTTGA GCCCAATACG
CCGGCTTTAC AGGACGAGTT ATACCTGAAC AATGGGAAAG GCAATTTTAT GCTCTCTAAA
GGCGCATTAC CGGATGTCAG TGCGAGCAGT AAATCCTGTG TGCGTCCATG TGATTTTGAC
ATTGACGGAG ATATGGACCT GTTTGTAGGA GGAAGGGTGA TTCCCGGCAA GTATCCGGTG
CCACCGACGT CGTATCTGCT GGTCAATAAT GGCAAAGGCC AGTTTACCCT TGCCAATGTT
CCTTTTGCCA ATAGTGGTAT GATCACGGAT GCGCGCTGGA CAGACATTGA CGGGGATGGC
CGTAAAGACC TGGTCATGTG TGGCGAGTTT ATGCCGCTGA TGGTTTTTCT CAATAAAACA
GGTGGTTTTC AGGATGCTAC TGCCCTGTAC TTTGAACAGT CAGAAGGAGG TTGCTGGTTT
GGGCTGACAC TGGCAGATGT AGATGGAGAC GGCCATGAAG ATATCATTGC GGGCAATATG
GGGGAGAATA CGCAGCTGCA CGCGTCTGCA AAACAACCTG CAGAATTGTA TTACGCTGAT
TTCGATAAGA ATGGTTCCAT AGATCCTTTC CTGAATTTCT ATATTGAAGG TGTCAGCTAT
CCGTTTGTGA GCCGGGATGA GTTGAATGAT CAGATTTATC CGATGCGCCG TAAGTTCTCT
TCGTACCGGC ATTATTCCAA TGCAAACATG AAGGATATTT TTTCTGCGGA AGAGCTGAGT
CAGGCGGGTA AGTTAACAGC TACTGACACA AAGACCCGCT GTTTCTTATA CCGCAATGGT
AAGTTTGTTA CTACTCCATT GCCTGTTGAA GCGCAATTCT CTGTGGTATC GAAGATATTG
GCGGCTGACT ATGACAAAGA CGGTAAGATG GACCTCTTGT TGCTGGGCAA CCATAGCGAT
AATCGTCTCA AACTGGGAAG TTTTGACGCC GGTTATGGTT GTCTGCTGAA AGGAGATGGA
AAGGGTGGTT TTACATATGT TTCGCAGACG CAGTCCGGCT TGTGTGTAAA AGGAGATGTG
AAATCTGCTG CTGTGGTGAA TATTGGCAGC AATCCTTATA TCATGATCGG TATCAACAAT
AAAGGAATAA CCCTGTTTAA AGTCAACTAA
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| Protein sequence | MISYSTAIHQ CSPRSAVRPG IFLTLLLTLR VSAAIAQQPL FQQLPVKTTN IKFSNTLNET
EKFNVLAYEY FYNGGGVAVG DINNDGLQDL FFTANMGPDK LYLNKGNMVF SDITRNAAKD
LEGRPEGWKT GVTMADVNGD GLLDIYVCYS GKKSDELRRN QLFINLGNAK FAEKAKEYGL
DDPGYSTNAV FFDYDNDGDL DMFLLNHNVI KIDNMEFARY KNETDPLAGN KLYRNDNNHF
TEVSKQAGII QNPLTFGLGV AIADINQDGW QDIYVTNDYN ERDYLYINKH DGTFAEDATN
CFSHLSHFSM GVDIADFNND ALPDVMTLDM LPEDNQRQKL LQLQENYESF ELMISQDLYK
QYMRNMLQLN NGDGTFSEIG QLAGVSNTDW SWCPLIADLD NDGYKDILVT NGYLRDYTNK
DFLRYWGDYK VKKAIDREPV LLMDLVSAMP STSLQNYVFR NNKDLTFSNM QQKWGFDAGG
ISSGAVYADL DNDGDLDLVI NKINEPAAVY QNMSREQGKA AAYLSLQLKG AGMNTVAVGA
KVYVYNKGNI QYQEVNPNRG YLSAVSTRLL FGLGDNTQVD SVRIIWPDNK VQRLTNVAAN
QLLTVAYAPD ASLPASHKTM PGWFRNADSL FTYRHSDISE NDFKRQLLMM FMYSRTGPVF
EKADVNKDGL EDLYIAGDHE QAAAIYLQKA GGGFTQGTKI VSGTEVASQV AAAAFFDANG
DGAPDLYVAK GGYSLFEPNT PALQDELYLN NGKGNFMLSK GALPDVSASS KSCVRPCDFD
IDGDMDLFVG GRVIPGKYPV PPTSYLLVNN GKGQFTLANV PFANSGMITD ARWTDIDGDG
RKDLVMCGEF MPLMVFLNKT GGFQDATALY FEQSEGGCWF GLTLADVDGD GHEDIIAGNM
GENTQLHASA KQPAELYYAD FDKNGSIDPF LNFYIEGVSY PFVSRDELND QIYPMRRKFS
SYRHYSNANM KDIFSAEELS QAGKLTATDT KTRCFLYRNG KFVTTPLPVE AQFSVVSKIL
AADYDKDGKM DLLLLGNHSD NRLKLGSFDA GYGCLLKGDG KGGFTYVSQT QSGLCVKGDV
KSAAVVNIGS NPYIMIGINN KGITLFKVN
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