Gene Cpin_6724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6724 
Symbol 
ID8362915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8417800 
End bp8418633 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content49% 
IMG OID644968856 
Product2,5-didehydrogluconate reductase 
Protein accessionYP_003126326 
Protein GI256425673 
COG category[R] General function prediction only 
COG ID[COG0656] Aldo/keto reductases, related to diketogulonate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.668211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.658132 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATAA CAACTATAGA TGGCGCTGTC ACACTGGCTA ATGGCGTGCA CATGCCTTAC 
CTGGGACTCG GTGTTTATAA AACGAAGAAC GGACAGGAAG TGCGCGATGC TGTGACCTAT
GCCTTGGACG CAGGGTACAG GCATATAGAT ACTGCTGCTG CCTATTACAA TGAGGAAGGC
GTTGGGGCGG CTATTGCCAG TCATCCGGTA GCCAGAAAAG ACATCTTCAT CACTACAAAA
GTCTGGAATT CAGATCAGGG ATACGACACG ACAATCAGGG CTTTTCATGA TTCGCTGCAA
CGGCTGGGTA CAGACTATCT TGATCTTTAC CTGCAACACT GGCCCGTAAA AGGGAAGTAT
AAGGAGACCT GGAGGGCCAT GGAGACTTTA TACCAGGAGG GCAAGGTCAG GGCGATAGGA
GTATCTAACT TTCTTCAGTT CCAGCTGGAA GATCTGATGG GGAATGCCCG TGTTGCCCCT
ATGGTAGATC AGGTAGAGTT TCATCCTTTC CTGCAACAGC CGGACCTGGT TGCTTTTGCA
AAAGCGAATC AGATACAGTT TGAGTCCTGG TTTCCGCTGA TGCACGGTCG GGCGTTTGGT
GTTGAGATAT TCACAAGAAT AGCCGCAAAG CATCAGATTA CGATAGCGCA GCTGCTGTTA
CGCTGGAATC TGCAAAGGGG GATTGTGATC ATTCCCAAAA GCGTTCGCCA GGCAAGGATC
ATAGAGAATG CGCAGTTGTT TGATTTTGTG TTACCACAGG AGGATATGGA GATTCTTAAC
AGTCTGGATG AAGGCGCCCG TATGGGGCCT GATCCCGCAA ACTTTAATTT CTAA
 
Protein sequence
MNITTIDGAV TLANGVHMPY LGLGVYKTKN GQEVRDAVTY ALDAGYRHID TAAAYYNEEG 
VGAAIASHPV ARKDIFITTK VWNSDQGYDT TIRAFHDSLQ RLGTDYLDLY LQHWPVKGKY
KETWRAMETL YQEGKVRAIG VSNFLQFQLE DLMGNARVAP MVDQVEFHPF LQQPDLVAFA
KANQIQFESW FPLMHGRAFG VEIFTRIAAK HQITIAQLLL RWNLQRGIVI IPKSVRQARI
IENAQLFDFV LPQEDMEILN SLDEGARMGP DPANFNF