Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6724 |
Symbol | |
ID | 8362915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 8417800 |
End bp | 8418633 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644968856 |
Product | 2,5-didehydrogluconate reductase |
Protein accession | YP_003126326 |
Protein GI | 256425673 |
COG category | [R] General function prediction only |
COG ID | [COG0656] Aldo/keto reductases, related to diketogulonate reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.668211 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.658132 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATAA CAACTATAGA TGGCGCTGTC ACACTGGCTA ATGGCGTGCA CATGCCTTAC CTGGGACTCG GTGTTTATAA AACGAAGAAC GGACAGGAAG TGCGCGATGC TGTGACCTAT GCCTTGGACG CAGGGTACAG GCATATAGAT ACTGCTGCTG CCTATTACAA TGAGGAAGGC GTTGGGGCGG CTATTGCCAG TCATCCGGTA GCCAGAAAAG ACATCTTCAT CACTACAAAA GTCTGGAATT CAGATCAGGG ATACGACACG ACAATCAGGG CTTTTCATGA TTCGCTGCAA CGGCTGGGTA CAGACTATCT TGATCTTTAC CTGCAACACT GGCCCGTAAA AGGGAAGTAT AAGGAGACCT GGAGGGCCAT GGAGACTTTA TACCAGGAGG GCAAGGTCAG GGCGATAGGA GTATCTAACT TTCTTCAGTT CCAGCTGGAA GATCTGATGG GGAATGCCCG TGTTGCCCCT ATGGTAGATC AGGTAGAGTT TCATCCTTTC CTGCAACAGC CGGACCTGGT TGCTTTTGCA AAAGCGAATC AGATACAGTT TGAGTCCTGG TTTCCGCTGA TGCACGGTCG GGCGTTTGGT GTTGAGATAT TCACAAGAAT AGCCGCAAAG CATCAGATTA CGATAGCGCA GCTGCTGTTA CGCTGGAATC TGCAAAGGGG GATTGTGATC ATTCCCAAAA GCGTTCGCCA GGCAAGGATC ATAGAGAATG CGCAGTTGTT TGATTTTGTG TTACCACAGG AGGATATGGA GATTCTTAAC AGTCTGGATG AAGGCGCCCG TATGGGGCCT GATCCCGCAA ACTTTAATTT CTAA
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Protein sequence | MNITTIDGAV TLANGVHMPY LGLGVYKTKN GQEVRDAVTY ALDAGYRHID TAAAYYNEEG VGAAIASHPV ARKDIFITTK VWNSDQGYDT TIRAFHDSLQ RLGTDYLDLY LQHWPVKGKY KETWRAMETL YQEGKVRAIG VSNFLQFQLE DLMGNARVAP MVDQVEFHPF LQQPDLVAFA KANQIQFESW FPLMHGRAFG VEIFTRIAAK HQITIAQLLL RWNLQRGIVI IPKSVRQARI IENAQLFDFV LPQEDMEILN SLDEGARMGP DPANFNF
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