Gene Cpin_6720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6720 
Symbol 
ID8362911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8415076 
End bp8415501 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content46% 
IMG OID644968852 
ProductActivator of Hsp90 ATPase 1 family protein 
Protein accessionYP_003126322 
Protein GI256425669 
COG category[S] Function unknown 
COG ID[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.902284 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.793451 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACGA AAACAAGGAC TGCCATCACC ATCGAAAGTA CTGTTCAGGC GCCGGTAGCT 
AAAGTCTGGG ATTACTGGAA CAAACCGGAG CATATCACAC ATTGGGCTTT CGCGTCTGAC
GACTGGCACG CACCAAAAGC AGAAAATGAC CTGCGTACCG GCGGTAAATT CAGTACCACC
ATGGCAGCTA AAGACGGTAG TTTCAGTTTT GAATTCGGCG GTGAGTATAC AGACGTGAAG
GAACATAAAC TGATAGAATA CACCATGGGA GATGGCAGAA AAGTAAGCGT ACTCTTCACT
ACAGTTGAAG ATGCGACGAA AGTGGTGGAA ACATTTGAGG CGGAAGATGA AAACCCGGTG
GAAATGCAAC GTGAAGGCTG GCAGACAATC CTGAATAACT TCAAGAAATA TACTGAAAGT
CACTAA
 
Protein sequence
MTTKTRTAIT IESTVQAPVA KVWDYWNKPE HITHWAFASD DWHAPKAEND LRTGGKFSTT 
MAAKDGSFSF EFGGEYTDVK EHKLIEYTMG DGRKVSVLFT TVEDATKVVE TFEAEDENPV
EMQREGWQTI LNNFKKYTES H