Gene Cpin_6707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6707 
Symbol 
ID8362898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8403023 
End bp8403415 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content44% 
IMG OID644968839 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003126309 
Protein GI256425656 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGAC TTATGTCTGA TAAAGCAGCA GTAGCGGAAG TCGTTACAGG GGAGAAATGT 
TCCTATGAGA ACAGTCAGGA CGCGGTAAGA TCCATAAGGG ACGCATTTGA CGCTATACAG
GGCAGATGGA CACTTCCTAT ACTGATATCG CTGGCATACG AACCAAAGCG TTTTATGCAG
CTATCCCGTG ACATACCAGG TATCTCTGAT AAGATCTTGT CAAGAGAACT GAAGCTGATG
GAAATGAACC AGCTGCTGGC CCGTACCTTC AGCGAAGAAT CTTCTTCAGT AGTGGAATAT
AGTCTGACGA AACATGGCAG ATCTGTTGAA AAACTGATGA AAGAGTTAAA AACCTGGGGC
GATACACACA GAAAGCAAAT TTTAGGAAAA TAA
 
Protein sequence
MKGLMSDKAA VAEVVTGEKC SYENSQDAVR SIRDAFDAIQ GRWTLPILIS LAYEPKRFMQ 
LSRDIPGISD KILSRELKLM EMNQLLARTF SEESSSVVEY SLTKHGRSVE KLMKELKTWG
DTHRKQILGK