Gene Cpin_6705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6705 
Symbol 
ID8362896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8401088 
End bp8402095 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content44% 
IMG OID644968838 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003126308 
Protein GI256425655 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTT TAGCTAAGCG CGCAGTCATG ATATCGCTTT CCCTGATGAT GGGGAATACA 
CTTCTCTATT CTCAACACAA GGATCATAAG ATGGAACAGT CACGATCTGC GGGCACTCAT
ACAGTTGCCG ATATTCAAGG TGCTATTTTA TATAAGACAG TATCAGTTGG CGACTACCAT
ATATTTTACA GGGAAGGGGG AAGTAGTGAC AAACCAACCA TTATCTTTCT GCACGGTTTC
CCGTCTTCTT CCCGGATGTG GCAGCCGTTA CTGGAAAAGC TCTCCGCTGA CTACCATGTC
ATTGCGCCTG ACTATATAGG CTTTGGGCAT AGCAGTCAGC CTCCTGTTGA CAGTTTTGAC
TATACTTTTG ATAACCTGTC GGATTATACT GACAGGTTTA TCACACAGCT GGGCTTAAAC
AGGTTTATAT TGGTACAACA GGATTATGGC GGACCTATTG GTATGCGGAT AGCTGAGAAA
CATCCGGAGA AAATACAAGC CATCATTGTA CAGAATGCCG TCAGTCATAA TGAAGGACTT
TCACCTCTAT GGGAAACCAG GAAAGCATTC TGGGCGAATA AGGGGCAATA TTATGATGCC
GTAAAAAAGA ACTTTATCAG CTTTGAAGCG ACTCGGCAAA GGCATATTGG TAGTACACCC
GTACCGGAGC GGATCAACCC TGACAATTAT ACAGATGAAT ACCTGTTCCT GAATCAACCA
GGTATGGCAG ATATCCAGCT GGAGCTGTTT TACGATTACC AGAGTAATGT CAGATCATAT
CCCAGGTGGC AGGAATGGCT CAGCAAACAT CAACCCAAAA TGCAGGTCAT ATGGGGACAA
TATGATCCTT CTTTTACAGT AGCCGGCGCC TGGAAATACA AGGAGAATGT TCCGGATGCA
GAGGTACATA TTGTTGAAGG AGGACATTTT GCACTGGATG AAGCTGAGCC GGTTATTTTA
AGTCTGATGC AGGATTTTCT AAAACGGATA ACGGCGAAAA CGGAGTAG
 
Protein sequence
MKFLAKRAVM ISLSLMMGNT LLYSQHKDHK MEQSRSAGTH TVADIQGAIL YKTVSVGDYH 
IFYREGGSSD KPTIIFLHGF PSSSRMWQPL LEKLSADYHV IAPDYIGFGH SSQPPVDSFD
YTFDNLSDYT DRFITQLGLN RFILVQQDYG GPIGMRIAEK HPEKIQAIIV QNAVSHNEGL
SPLWETRKAF WANKGQYYDA VKKNFISFEA TRQRHIGSTP VPERINPDNY TDEYLFLNQP
GMADIQLELF YDYQSNVRSY PRWQEWLSKH QPKMQVIWGQ YDPSFTVAGA WKYKENVPDA
EVHIVEGGHF ALDEAEPVIL SLMQDFLKRI TAKTE