Gene Cpin_6700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6700 
Symbol 
ID8362891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8396801 
End bp8397820 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content47% 
IMG OID644968833 
Productaldo/keto reductase 
Protein accessionYP_003126303 
Protein GI256425650 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATGA ATAATATCGG ACAGAGCGTA TTAGGTAGCT GGGGATTAGA GGTGCCCACT 
ATTGGTCTTG GTTGTATGGG TATGACAGGA TTTGCCGGGG GGAGTGATCT GTATGGTGCT
GCTGACGAAA CGGTAGCCAT CAGTACGATT CACAGAGCGC TGGAGCTGGG TTGTAACCTC
CTGGACACCG CCGATATCTA CGGCCCGTAT TTAAATGAGC AATTGATTGC CAGGGCAATC
AACGGAAAGA GAAGCCAATA TATTATTGCT ACTAAGTTTG GTTATGAGAT CGATGACGAG
GGACAGGCAA CCTGGCAGAT CAACGGGACG AAGCAATATG TAAAAAAAGC GGTGGAGCGC
TCGCTTCGTC ATCTTGGTAC AGATTACATC GATCTATACT ATCTGCATCG CCTGGATCCC
AAGACGCCTA TTGAAGAAAC AGTTGAAGCA ATGGCTGATC TTATAAGAGA GGGCAAGGTA
GGGTATATCG GTTTATCAGA AGTATCCAGT GAAACTATTC ACCGTGCTCA CCAGATTCAC
CCTATTACAG CGGTACAGTC TGAATATTCC ATTTTCGAAA GGAGTATTGA AACTGCGGGT
ATTATTGACA CGCTTCAGAA ACTGGGTATC GGTCTGGTAG CCTATTCTCC GTTGGGACGT
GGATATCTTA CAGGTAATAT CACAAAGGCA GACGATCTGT CCGCTGATGA CTTCAGAAGG
CATATGCCAC GTTTTCAGGG AGAACAACTG GAGAAGAATC TTGTCCTGGT CAGGAAGATT
ACTGCGATGG CAACAGAAAA AGGGATCACG CCTTCTCAGT TAGCGATTGC CTGGGTGTTA
GCGAAAGGAC ATTTGCCTAT TCCAGGTACC AAGCGCCCTG AATATCTGGA GCAGAATATA
GCAGCCACTG CTATTCAGTT ATCCGGTGAG GATATAAACA GGCTGGAATC GATCATTCCG
CTGGGAACTG ATCTGGGTGA CAGGTATGAT GCTGCGTCGA TGAATAACAT TGACCAGTAA
 
Protein sequence
MTMNNIGQSV LGSWGLEVPT IGLGCMGMTG FAGGSDLYGA ADETVAISTI HRALELGCNL 
LDTADIYGPY LNEQLIARAI NGKRSQYIIA TKFGYEIDDE GQATWQINGT KQYVKKAVER
SLRHLGTDYI DLYYLHRLDP KTPIEETVEA MADLIREGKV GYIGLSEVSS ETIHRAHQIH
PITAVQSEYS IFERSIETAG IIDTLQKLGI GLVAYSPLGR GYLTGNITKA DDLSADDFRR
HMPRFQGEQL EKNLVLVRKI TAMATEKGIT PSQLAIAWVL AKGHLPIPGT KRPEYLEQNI
AATAIQLSGE DINRLESIIP LGTDLGDRYD AASMNNIDQ