Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6699 |
Symbol | |
ID | 8362890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 8395861 |
End bp | 8396772 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644968832 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003126302 |
Protein GI | 256425649 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAG AATCTCCATA TCATGTAAAG ACAGTATCCG AACAACATCG GATACTGTCT TTACCCAAAC CATATCATCC GCTTGTCAGT GTATTTAATT TTGCGGATAT GCAATATGAT ACTGATGAAT GCTACCGGAG TATTTTGCTG GATCTGTATT GTATTTCCAT TAAAAGATGT GTGACCCAGA AAGTGAAGTA TGGACAAAGC CATTATGACT TTGATGAAGG AGTCATGTCT TTTCTGGCCC CGAAACAGGT CGTTTCTAAT ATTCCGGATG ATCATCGGCC GGAAGGCTGG AGCCTGGTAT TTCACCCGGA TTTCATCCGC AGGCATCCAT TAAATACCAG AATAAAGAGC TGCGAGTTTT TTAGTTATGC GGTTAATGAA GCGCTCCATC TCTCAGAAAG AGAAGAAGAG ATGGTGATCG CTATTATGCA AATGCTCCGT ACGGAGATAG AAAAGGGGAT AGATCATTAT AGTGAAGGTG TAATACTATC TTATATTGAT CTGCTGTTGA GTTATTCTGA GCGGTTTTAT AACAGGCAGT TCCTTACCCG GAAAACGATG AATAGTGATT TTTTGGTGAA GTTTGATGAA TTATTGTCGA CATATTTCGC AGAAGAGAGT ACAGAAAATA TAACGCTGCC GTCGGTACAA TATTTCTCTG ACAAACTGCA TCTGTCTCCC AATTACCTGA GCAATATGCT TCGTTCGCTT ACCGGTAAGA GTACGCAGCA GCATATACAG GACAAACTGA TCGAGAAATC AAAAGAGCTC CTGACTACTA CCAATTTATC GGTGGCTGAA ATAGCCTACC TGTTTGGCTT TGAGTATCCA CAGTCCTTTA ATAAGCTATT CAAAAATAAG ACACAATATA CCCCGCTTGC TTACAGAAAA CTTTTTAATT AA
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Protein sequence | MKKESPYHVK TVSEQHRILS LPKPYHPLVS VFNFADMQYD TDECYRSILL DLYCISIKRC VTQKVKYGQS HYDFDEGVMS FLAPKQVVSN IPDDHRPEGW SLVFHPDFIR RHPLNTRIKS CEFFSYAVNE ALHLSEREEE MVIAIMQMLR TEIEKGIDHY SEGVILSYID LLLSYSERFY NRQFLTRKTM NSDFLVKFDE LLSTYFAEES TENITLPSVQ YFSDKLHLSP NYLSNMLRSL TGKSTQQHIQ DKLIEKSKEL LTTTNLSVAE IAYLFGFEYP QSFNKLFKNK TQYTPLAYRK LFN
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