Gene Cpin_6678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6678 
Symbol 
ID8362869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8373833 
End bp8374987 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content43% 
IMG OID644968812 
ProductMicrosomal epoxide hydrolase 
Protein accessionYP_003126282 
Protein GI256425629 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAAA AAATGACCCA GATGACACCC TTTACAATAG CAATTCCACA AGAAGTATTA 
AATGATCTGT CTATAAGATT AAAACAGACG CGTTGGACTG ATGAACCAGA AAATGCTGGC
TGGAATTATG GCACCAATCC GGCTTATTTA CGCGAACTGG TAGATCACTG GCAGAATAAT
TACGATTGGA GAACCCAGGA GACCTATCTG AATAAATTTC CACAGTTTAA GATAGCAATA
GATGGTACCA TGGTGCATTT TATATATGTG AAAGGAAAAT CTAACGACGG CAAACCATTG
ATCTTAACCC ACGGATGGCC AGATAGCTTC TATAGGTTTC ATAAAATAAT CCCCATGCTT
ACTGATCCCG AAAATTATGG CGGTAATGCA GCAGAGGATT TTGATCTTGT GATCCCCTCA
ATACCTGGTT TTGGATTTTC AGACCGCGTT CCGCAAAGTA GTGATCAGAC GGCCCGTTTA
TGGGCCAGGT TAATGACAGA GGTATTAGGA TACCGAACGT TCTTTGCAGC AGGAGGCGAT
ATGGGTGCAA CAATCAGCAA ATCATTGGCC AATCAGTATC CTTCACAGGT CTCTGCTATT
CATATCACGG ATGTTGGCTA TCCAAACGGG CGGGAGGATT GGTTAACAAT GTCTGCCCCG
GAGCAGGAGT TTGGCAGCTT TATCCAGCAA TGGTTTTTTA CAGAAGGGGC TTTTAACCTT
CTTCAGACGA CAAAGCCGCA AACACTAGGT TACGGCTTAA ATGATTCCCC TGTAGGTCTA
GCATCCTGGA TAATTGAAAA GTTCCATGCT TGGTCTGGTA AGCCGGAAAA CTTAGACGAT
CAATATACGA AAGATGACCT GATCACCAAT ATCATGATAT ATTGGATCAC GGAAACCATT
AATACCTCAA TCCGTACATA TGCTGAGGAA GGTAAGGCCG CCTGGACAAC AGGCTTGCAA
TCGGAAATGA GAGTCGAAGC CCCTACAGGC GTAGCCTTAT TTCCGGGAGA AGCACCTTTT
CCAATAGAAT GGGCCAACAG GAAAGTGAAT GTGCAACGAT TTAATATTAT AGAAAAAGGT
AGCCATTTTG CTGCGTTGAC TGTGCCAGAT CTGTATGCAA AAGAATTGAG GGATTTCTTT
TATGGCAAAT TTTAA
 
Protein sequence
MNQKMTQMTP FTIAIPQEVL NDLSIRLKQT RWTDEPENAG WNYGTNPAYL RELVDHWQNN 
YDWRTQETYL NKFPQFKIAI DGTMVHFIYV KGKSNDGKPL ILTHGWPDSF YRFHKIIPML
TDPENYGGNA AEDFDLVIPS IPGFGFSDRV PQSSDQTARL WARLMTEVLG YRTFFAAGGD
MGATISKSLA NQYPSQVSAI HITDVGYPNG REDWLTMSAP EQEFGSFIQQ WFFTEGAFNL
LQTTKPQTLG YGLNDSPVGL ASWIIEKFHA WSGKPENLDD QYTKDDLITN IMIYWITETI
NTSIRTYAEE GKAAWTTGLQ SEMRVEAPTG VALFPGEAPF PIEWANRKVN VQRFNIIEKG
SHFAALTVPD LYAKELRDFF YGKF