Gene Cpin_6657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6657 
Symbol 
ID8362846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8349327 
End bp8349896 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content45% 
IMG OID644968790 
Producthypothetical protein 
Protein accessionYP_003126262 
Protein GI256425609 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGTA TAGCTATCTT TTGCGGGTCT AATTTCGGTA AAGATCCTGT CTACAAGGAA 
GCCACTATTG AACTGGCCCG TTGTATCGTA AAAAATAATC TGCGACTGGT ATACGGCGGC
GCAGCTGTTG GTTTGATGGG ACTGATTGCC GATGAAGTAT TGGCTCTTGG CGGACAAGTG
ATCGGTGTAT TACCTGAGAA GCTGAGAGAC AGGGAAGTAG GGCATAAAAA CCTCACAGAA
CTGCACATTG TGAGTACTAT GCATGAACGC AAAGCGATGA TGGCCAACTT ATCTGATTAT
TTCGTCGCAA TACCCGGCGG AATCGGCACA CTGGAAGAAA TTGTGGAAGT ATTTACCTGG
GCACAGCTGG GATTACATGC CAAACCTTGC GGTATGTTGA ATATCAATGG TTTCTACGAT
AAGTTCCGCG ACCTGCTGGC CTCCATGTCC CAGGAAGGAT TCCTATCAGA GCACCAGTTC
AATTCACTTA TTTTTGATAA TGAGCCGGAA AGTCTGCTGC ATAAAGTCAT GAATCAGCAG
GTAGAATATC ATTCAAAATG GGTGAAATAA
 
Protein sequence
MKSIAIFCGS NFGKDPVYKE ATIELARCIV KNNLRLVYGG AAVGLMGLIA DEVLALGGQV 
IGVLPEKLRD REVGHKNLTE LHIVSTMHER KAMMANLSDY FVAIPGGIGT LEEIVEVFTW
AQLGLHAKPC GMLNINGFYD KFRDLLASMS QEGFLSEHQF NSLIFDNEPE SLLHKVMNQQ
VEYHSKWVK