Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6657 |
Symbol | |
ID | 8362846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 8349327 |
End bp | 8349896 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644968790 |
Product | hypothetical protein |
Protein accession | YP_003126262 |
Protein GI | 256425609 |
COG category | [R] General function prediction only |
COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
TIGRFAM ID | [TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1 [TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGTA TAGCTATCTT TTGCGGGTCT AATTTCGGTA AAGATCCTGT CTACAAGGAA GCCACTATTG AACTGGCCCG TTGTATCGTA AAAAATAATC TGCGACTGGT ATACGGCGGC GCAGCTGTTG GTTTGATGGG ACTGATTGCC GATGAAGTAT TGGCTCTTGG CGGACAAGTG ATCGGTGTAT TACCTGAGAA GCTGAGAGAC AGGGAAGTAG GGCATAAAAA CCTCACAGAA CTGCACATTG TGAGTACTAT GCATGAACGC AAAGCGATGA TGGCCAACTT ATCTGATTAT TTCGTCGCAA TACCCGGCGG AATCGGCACA CTGGAAGAAA TTGTGGAAGT ATTTACCTGG GCACAGCTGG GATTACATGC CAAACCTTGC GGTATGTTGA ATATCAATGG TTTCTACGAT AAGTTCCGCG ACCTGCTGGC CTCCATGTCC CAGGAAGGAT TCCTATCAGA GCACCAGTTC AATTCACTTA TTTTTGATAA TGAGCCGGAA AGTCTGCTGC ATAAAGTCAT GAATCAGCAG GTAGAATATC ATTCAAAATG GGTGAAATAA
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Protein sequence | MKSIAIFCGS NFGKDPVYKE ATIELARCIV KNNLRLVYGG AAVGLMGLIA DEVLALGGQV IGVLPEKLRD REVGHKNLTE LHIVSTMHER KAMMANLSDY FVAIPGGIGT LEEIVEVFTW AQLGLHAKPC GMLNINGFYD KFRDLLASMS QEGFLSEHQF NSLIFDNEPE SLLHKVMNQQ VEYHSKWVK
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