Gene Cpin_6656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6656 
Symbol 
ID8362845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8347711 
End bp8349057 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content45% 
IMG OID644968789 
Producthypothetical protein 
Protein accessionYP_003126261 
Protein GI256425608 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTACATC TCAGCAAAGC AAACGGCCAG GGGCACCCCC AACGCAGGTG GATAACCACC 
CTGTTATGTG CTCTATTTCT TTGTCTGTAT GGGCAGACCT ACGGACAAAC ACCCACACCA
GTTGATACCC TAAAAACGGA TTCTACTACC ACAGATCGTG TGAAAGCTGC GAAGCAGGGA
GAAGATCTGT CGTCACAATA TGACCTGGGT GACCTTGTAA GGGGTATTTT ACACAAAAAA
ACCGATCTGA CAGGGAAAAC CCGCTCAGGG ATCATTGTCA TCCCTAATGT GGCTGCAAAT
CCCAGTATCG GGGCTCAGAT AGGGATTAAG GCAGTAGCCG GTAAAAAGTT CGGCAGTGAC
CCCAATACAC TTATGTCAGT AGGGGCTACT TCCGCTTCCA TTACCACAAA AGGAATTATT
TATTTCTATA TTAGCCATAA TATTTATACA TCGGGTAATA AGTGGAACTT CCAGGGAAGC
CTGGTAGCGG CAAAGACGGT TACTCCCGAC TATGGCCTGG GTATTGGCAG GGCAACGGAA
GGTACGGCAT TGGAACACGT ACTAAACAAT CCTGATCGTA AACCCAGGGG CTTACATGCA
CAGTTTTACA ACTTCCGTGA AAAAGTGTAT AAAGAAGTGA GTAAAGGACT CTTTTTAGGC
GGCGGAGTAT CCTTTGATAT CCGCAGGAAA ATTGATGAAA GAGATTCCAC TAATGGTCCG
ACGCCCTACA ATATCTACAG CGACAGTCAT GGTTTCAAAA GAGCGCATTA TATGGCGAAC
GGGCTGCTGT TTAATGTGCA GTATACTACC CGTGATAACC AGAACAGGGC TTATAAAGGA
ATGTACTTAG ACGCAGGTTT CAGGGCTAAC CAGACCTGGT TAGGTAGTAC GCGAAACGCA
TTACAGTTTT CTACAGATTT CAGAAAATAT GTGAGTCTGT CAAAACAACA TCCTGAACAT
GTCCTCGCAT TCTGGAACTG GAACTCATTC CTGCTGGCAG GTAATATACC ATATCTTGAA
TTACCAGGTA CCGGTAAAGA CCCCAATTTC CGTAGCGGAA GGGGATATAC CGTGGGATAC
TTTAAAGGCA CACAATATAG TTATGCAGAG ATGGAATACC GCTTCCCGAT ACTGCGTAAT
AATTTAATCA GTGGTGTAGC GTTCTTTCAT CTGCAAACTA CCAACGATGA ATCAGGCACT
AAAATATACC AGGTATTACA ACCCGGCGGT GGCGGCGGAT TACGTATCCT GTTCAATAAG
GTAACACGTA CAAATTTATG TCTTGATTAT GCCTGGGGTA AGTTTGGTGC AAGAGGCTTC
TTCCTTGGTT TGAATGAAGC GTTTTAA
 
Protein sequence
MLHLSKANGQ GHPQRRWITT LLCALFLCLY GQTYGQTPTP VDTLKTDSTT TDRVKAAKQG 
EDLSSQYDLG DLVRGILHKK TDLTGKTRSG IIVIPNVAAN PSIGAQIGIK AVAGKKFGSD
PNTLMSVGAT SASITTKGII YFYISHNIYT SGNKWNFQGS LVAAKTVTPD YGLGIGRATE
GTALEHVLNN PDRKPRGLHA QFYNFREKVY KEVSKGLFLG GGVSFDIRRK IDERDSTNGP
TPYNIYSDSH GFKRAHYMAN GLLFNVQYTT RDNQNRAYKG MYLDAGFRAN QTWLGSTRNA
LQFSTDFRKY VSLSKQHPEH VLAFWNWNSF LLAGNIPYLE LPGTGKDPNF RSGRGYTVGY
FKGTQYSYAE MEYRFPILRN NLISGVAFFH LQTTNDESGT KIYQVLQPGG GGGLRILFNK
VTRTNLCLDY AWGKFGARGF FLGLNEAF