Gene Cpin_6655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6655 
Symbol 
ID8362844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8346487 
End bp8347623 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content45% 
IMG OID644968788 
Productacyltransferase 3 
Protein accessionYP_003126260 
Protein GI256425607 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGTAA ACAGGACACA GGATCCTCAT GTAATTACTA AACCACATTT CGAAATCCTA 
GACGGGCTCA GGGGGCTTGC CGCCATTGCA GTAGTCATTT TCCACTTCAT GGAGATTGCC
GTTCCCGATT ATCACAATAG CTTCATTTCA CATTCGTATC TCGCTGTCGA TTTCTTTTTC
TGTCTATCCG GATTTGTCAT CGCTTATGCC TATGACACTA AAATCGCGCA GATAGGTCTT
GTCGAATTTA TGAAACTCCG CCTTATCCGC CTGCATCCGC TGGTGGTCAT CGGCGCTGTG
ATTGGGTTGA CCGTCTTCAT CTTCGATCCA TTCAGCAATC TCTATCAGAT CTATGCCAGC
AAAACATTGC TGGTGTTTCT TTCTGCCAGT CTGATGATTC CTTATCCACT GGTAAAGGAG
CGATACTTCA ATCTTTTCCA TCTGAATCCT CCTACCTGGT CATTGTTCTG GGAATACATC
GCCAACATCT TTTATGCATT AGTGCTGGTG AGGATAAAGA ATAACAAGCT ACTCTGGGTA
CTGACGATCC TTGCTGCAGG TGCATTATTC TATGCCTCTC AACAAGCAAA GTTCCTCGCT
GTGGGATGGG GTGGTGATAA TGTTTCCGCT GGTGCTGCCA GGGTCGCTTT TTCCTTTCTG
GCCGGCATAC TGGCTTTTCG CTCCGGTAAG ATCATACGTT CCAAAATCGG CTTTATTCCA
ATCGGGATAT TACTGCTGGC AACCTTTATG ATTCCTTTTT CGGAAAAGTA TAACTGGTAT
CTTGATCCGC TGGTAGTCAT TTTCTTTTTT CCTTTCCTTG TATTGCTGGG AGCCGGTGCG
CAAACGAATA ACTTCAGCCA TAAAATCTGT AAGTTTTCCG GGGATATCTC CTATCCGCTG
TATATGATCC ACTATCCTTT CATCTGGCTG TTTATGAGCT ATGTGGAGAA GTATAAACCT
ACCTTACCGA CAATGGTATG GATCATGATA GCCGGTACAG TTGCATTGAC AATAATGGCT
TATCTGGTGT TGCAATACAT TGACACACCG ATCCGTAAAT GGCTGAAGAA CAGAAGAACC
GTTCCTGCTG TTGCCGTGGT GGCGCAGACA GCAAAAGTTG AGCGTCAGCA TTCGTAA
 
Protein sequence
MHVNRTQDPH VITKPHFEIL DGLRGLAAIA VVIFHFMEIA VPDYHNSFIS HSYLAVDFFF 
CLSGFVIAYA YDTKIAQIGL VEFMKLRLIR LHPLVVIGAV IGLTVFIFDP FSNLYQIYAS
KTLLVFLSAS LMIPYPLVKE RYFNLFHLNP PTWSLFWEYI ANIFYALVLV RIKNNKLLWV
LTILAAGALF YASQQAKFLA VGWGGDNVSA GAARVAFSFL AGILAFRSGK IIRSKIGFIP
IGILLLATFM IPFSEKYNWY LDPLVVIFFF PFLVLLGAGA QTNNFSHKIC KFSGDISYPL
YMIHYPFIWL FMSYVEKYKP TLPTMVWIMI AGTVALTIMA YLVLQYIDTP IRKWLKNRRT
VPAVAVVAQT AKVERQHS