Gene Cpin_6638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6638 
Symbol 
ID8362827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8326088 
End bp8327200 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content45% 
IMG OID644968771 
Productacyltransferase 3 
Protein accessionYP_003126243 
Protein GI256425590 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAACA ACGCCCTTCC TACTAAACCT CATTACCAGG TATTAGACGG ATTACGAGGT 
GTGGCTGCGA TCATAGTTGT ATGGTTCCAC CTTTGTGAGC CACATGCCAC GAGTCACCTT
ACCCAATGGA TCAATCACGG TTATCTTGCT GTCGACTTTT TCTTTCTGCT CTCCGGTTAT
GTTATCGGCT ACGCATACGA TGACAGATGG GATAAACTTA CAATAGGCAC ATTTTTAAGA
CGTCGGTTTG AGCGGCTGCA GCCGCTGGTT ATTCTCGGTA TGACGCTGGG CGCGATAGGC
TTCTATTTTA CGGAATCTGC TATATGGCCA TTGATCCATA CGGTGCCTGT ATGGAAAATG
CTGCTTGTGA TGGTGATAGG GTATACCATA TTGCCGGTTC CATTGTCTAT GGACATACGT
GGCTGGCAGG AGATGCATCC CTTAAACAGC GTGGGATGGT CTTTATTTTT TGAATACATC
GCCAATATTT TATACGCATT AGGGGTCAGA AAATTCCCCA ATTGGGCTTT ATCTATCCTG
GTGAGTTTAG CGGCGGCGGC GCTGGTATAT TTTGCTGTCA CCAATGCCAA TGGTGATGTA
ACCGGTGGCT GGACATTAAC AGTAGAACAG GTGAAAGTAG GGATGACGCG GGTAATGTAT
CCATTTTTTG CAGGACTATT ACTGTCAAGG ATAGGAAAAC CGGTACATAT CAAAAATGCT
TTTCTATGGT GTACAATATT GGTAGCTGCT ATACTGTTTA TGCCTCGTAT CGGCGGCGCT
GATCATTTAT GGATGAATGG TCTGTACGAA TCAGCATGTA TCATTCTGGT GTTCCCTTTA
ATAGTGCTGA TCGGAGCCGG AGCGAAGGTG ACTGGCAACA GGGAATATAA GATCTGCAAA
TTACTGGGAG ATATATCATA TCCGTTGTAC ATGACCCATT ATACACTGGT TTATTTCTAT
GTGGGATGGG TGAGTGACCA CAAAGGTATA ACAATGGCAG CGTCCTGGCC ATATGCGTTA
GCGACCTTTT TAGGGGCGAT CGCAGTCGCA TATGCGAGTT TGAAACTATT TGATGAACCG
GTACGAGCCT GGCTGCGTAA GAAGTTAAAA TAA
 
Protein sequence
MNNNALPTKP HYQVLDGLRG VAAIIVVWFH LCEPHATSHL TQWINHGYLA VDFFFLLSGY 
VIGYAYDDRW DKLTIGTFLR RRFERLQPLV ILGMTLGAIG FYFTESAIWP LIHTVPVWKM
LLVMVIGYTI LPVPLSMDIR GWQEMHPLNS VGWSLFFEYI ANILYALGVR KFPNWALSIL
VSLAAAALVY FAVTNANGDV TGGWTLTVEQ VKVGMTRVMY PFFAGLLLSR IGKPVHIKNA
FLWCTILVAA ILFMPRIGGA DHLWMNGLYE SACIILVFPL IVLIGAGAKV TGNREYKICK
LLGDISYPLY MTHYTLVYFY VGWVSDHKGI TMAASWPYAL ATFLGAIAVA YASLKLFDEP
VRAWLRKKLK