| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6630 |
|---|
| Symbol | |
|---|
| ID | 8362818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 8316861 |
|---|
| End bp | 8319395 |
|---|
| Gene Length | 2535 bp |
|---|
| Protein Length | 844 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644968762 |
|---|
| Product | ATPase AAA-2 domain protein |
|---|
| Protein accession | YP_003126235 |
|---|
| Protein GI | 256425582 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCAGA ATTTTTCACC GCAAGTAAAG GAGATCATTT CGTTTAGCAG AGAGGAAGCT
TTACGCTTGG GAAATGATTT CATCGGCACA GAGCACCTGC TGCTAGGCAT AATTCGAGAA
GGGGAAGGGA CAGCTGTTAA AATTCTGCAG GCCTTAAATG TAGACCTTTA TGAACTTCGT
AAAGAGGTTG AGTTGGCCGT AAAAGATAAG ACAGGAAAAA ATATTGCCAA TATCAACAGT
CTACCGCTTA CAAGGCAGGC AGAAAAGGTT ATACGTGTTA CCGTGCTCGA GGCAAAAGCC
CTCAAAAGCC CAACCGTGGA AACCGAGCAT TTAATGCTTT CAATCCTCAA GAATAAAGAA
AACGTTTGTA CACAAATCTT ACAACAGTTT GACGTGGATT ACGACACTTT TAAAAACGAA
CTGGGCTTCG TAAAATCAGC CGATCCTAAG GCAGAGTTTG ATGATCCTGG AGAAGAGGAG
TTTGAAGATG AGCGTAAGAG CTTTGCCTCC AAGGCTAAAC AAACCAATAC CAAGTCCAAA
ACCCCTGTGC TGGATAATTT CGGCAGGGAT ATTACCAAGC TGGCCGAGAG TGGCAGCTTA
GACCCTATTG TTGGTCGCGA GCAGGAAATT GAGCGTGTAT CGCAGATATT ATCCCGCCGT
AAGAAGAACA ATCCGATCCT TATCGGTGAA CCGGGTGTTG GTAAAACAGC TATCGTGGAA
GGCCTCGCGC TGCGTATCGT ACAGCGTAAA GTATCCCGTG TACTGTTTGA CAAACGCGTG
GTAAGCCTTG ATCTGGCGGC GCTGGTAGCG GGAACAAAAT ATCGCGGACA GTTCGAAGAA
AGGATGAAAG CCATCATGAA CGAACTGGAA AAGAACCGTG ATGTGATCCT GTTCATCGAC
GAGATCCATA CCATTGTAGG TGCAGGTGGT GCTTCAGGTT CCCTGGACGC TTCCAACATC
TTCAAACCGG CCCTGGCTCG TGGAGAACTC CAGTGCATCG GTGCATCTAC CCTCGATGAG
TACCGTATGT ACATTGAGAA AGATGGCGCG TTAGACCGTC GTTTCCAGAA AGTAATGGTA
GAACCTCCAA CCGTGGATGA AACTATTCAG ATCCTGAATA ATATCAAACC ACGCTACGAA
GAATACCATA ACGTAAGCTA TTCTCAGGAT GCGATTGAAG CGTGTGTAAA ACTCAGCGAC
CGTTACATGA CAGACCGTCT GTTACCTGAT AAGGCGATCG ACGTACTGGA TGAAGTAGGC
GCAAGAGTAC ACCTGAAAAA TATCAATGTT CCGCAAAATA TCCTCGACCT GGAAAAACAG
ATCGAAGACA TCAAGCAGGA AAAAAATAAA GTCGTAAAAA GCCAGCGTTT TGAAGAAGCT
GCTGCATTAC GCGATACCGA AAAGAAACTC GGAGAAGACC TGGAAAAGGC TAAGAACGTT
TGGGAAGAAG AAGTGAAGCA TAAACGTTAT CCGATCGACG AGGAAGCTAT CGCAGAAGTA
GTAAGCATGA TGACAGGTAT TCCTGTTAAA CGCATGGTAC AGGCTGAAAC TGAAAAACTC
CGTCGTATGG GTGAAGACCT GAAAGGCGCT GTAGTTGGTC AGGACGAAGC CATCTCGAAA
GTTACAAAGG CGATTCAGCG TAACAGGGTA GGGTTGAAAG ATCCTAAGAA ACCAATCGGT
ACTTTCATCT TCCTGGGTCC TACCGGGGTT GGTAAAACCG AGCTGGCAAA ATCCCTCGCA
CGTTATATGT TCGACTCAGA AGATAGCCTC ATCCGCATCG ATATGAGTGA ATACATGGAG
AAATTCTCCG TAAGCCGTCT GATAGGTGCG CCTCCGGGAT ACGTTGGTTA TGAAGAAGGT
GGTCAGCTGA CTGAAAAAGT ACGCCGCAAA CCTTATTCTG TAATTCTCCT GGATGAAATC
GAGAAAGCTC ACCCTGACAT CTACAACATC CTGTTACAGG TACTGGACGA TGGTATCCTG
ACCGACGGTC TTGGTCGTAA GGTGGATTTC AAGAACACCC TTATCATCAT GACGTCTAAC
ATCGGTGTAC GTCAGCTGAA AGATTTCGGT GCAGGCGTTG GTTTCACTAC CTCCGCAAAA
GCAAACACAG AAGAAGACAA TACTAAATCA GTAATTGAAA AAGCACTGAA ACGTACCTTC
TCTCCTGAGT TCCTGAACCG TATCGATGAT GTGATCATAT TCAACTCTCT GAGCAAAGAA
CATATCTATA CCATCATAGA TATCACTATG CAGAGTGTAC TGAAACGCCT TCAGAACCTG
GGCTTCAGCC TGGAACTGAC AGAAGAAGCC AAAGGCTTCC TGGCAGAGAA AGGTTACGAT
CAGCAGTTCG GCGCCCGTCC GCTGCACAGA GCCATCCAGA AATACCTGGA AGACCCACTG
GCAGAGGAAA TTCTGAATAT GAACATCCAT AACGGAGATG TCCTCATTGC AGATCTGGAC
AAGGAAAATC AGAAACTGAT CTTCACTTTA AAGAACTCTT CAAAGAGTAA CAAATCCGAA
AAATCAGAGG CATAA
|
|---|
| Protein sequence | MDQNFSPQVK EIISFSREEA LRLGNDFIGT EHLLLGIIRE GEGTAVKILQ ALNVDLYELR
KEVELAVKDK TGKNIANINS LPLTRQAEKV IRVTVLEAKA LKSPTVETEH LMLSILKNKE
NVCTQILQQF DVDYDTFKNE LGFVKSADPK AEFDDPGEEE FEDERKSFAS KAKQTNTKSK
TPVLDNFGRD ITKLAESGSL DPIVGREQEI ERVSQILSRR KKNNPILIGE PGVGKTAIVE
GLALRIVQRK VSRVLFDKRV VSLDLAALVA GTKYRGQFEE RMKAIMNELE KNRDVILFID
EIHTIVGAGG ASGSLDASNI FKPALARGEL QCIGASTLDE YRMYIEKDGA LDRRFQKVMV
EPPTVDETIQ ILNNIKPRYE EYHNVSYSQD AIEACVKLSD RYMTDRLLPD KAIDVLDEVG
ARVHLKNINV PQNILDLEKQ IEDIKQEKNK VVKSQRFEEA AALRDTEKKL GEDLEKAKNV
WEEEVKHKRY PIDEEAIAEV VSMMTGIPVK RMVQAETEKL RRMGEDLKGA VVGQDEAISK
VTKAIQRNRV GLKDPKKPIG TFIFLGPTGV GKTELAKSLA RYMFDSEDSL IRIDMSEYME
KFSVSRLIGA PPGYVGYEEG GQLTEKVRRK PYSVILLDEI EKAHPDIYNI LLQVLDDGIL
TDGLGRKVDF KNTLIIMTSN IGVRQLKDFG AGVGFTTSAK ANTEEDNTKS VIEKALKRTF
SPEFLNRIDD VIIFNSLSKE HIYTIIDITM QSVLKRLQNL GFSLELTEEA KGFLAEKGYD
QQFGARPLHR AIQKYLEDPL AEEILNMNIH NGDVLIADLD KENQKLIFTL KNSSKSNKSE
KSEA
|
|---|
| |