| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6621 |
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| Symbol | |
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| ID | 8362809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8304352 |
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| End bp | 8305578 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644968753 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_003126226 |
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| Protein GI | 256425573 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0266362 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0342677 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAT TTAACGTTCC TATTATATAT CGCAGTCCGC TGATCACGGC GATCAAAAAC
CGCCGTAAGC AGCAGGACCG TATGAAAAAG GATTTTACGC CAACCGTACT GGATTTCGGT
CCATTGAAAA TATTACTGGC CCGTCACTTT GGCTTCTGCT ATGGCGTGGA AAATGCCATC
GAAATTGCCT TTAAGACAGT AGAAGCCAAT CCTGGCAAAA GGATCTTCCT GCTCAGTGAA
ATGATCCACA ATCCACATGT TAATAACGAC CTGCTGGAAA AAGGGGTACA ATTCATCATG
GACACAGCCG GCACACAACT GGTGCCATGG GAATCACTGA CGCCTGAAGA TATCGTGATT
ATCCCGGCCT TCGGCACCAC CCTGGAAATC GAAGAGAAGC TGAGCTCCCT GGGCATTGCT
CCTTTGCAAT ACAATACGAC CTGTCCTTTT GTGGAAAGAG TGTGGAACAA GGCAGAACAG
ATCGGTAAGC AGTCTTACAG CGTGATCGTA CATGGTAAAC CTGGTCATGA GGAAACCCGT
GCTACCTTCT CCCATAGCCG CAGCAATACG CCGACCGTCG TTGTAAAAGA TATAAAAGAA
GCTCAGTTAT TAGCCACCTT TATCACCGGA GAGAAAAACC CGGAAGAATT TTATATCCTC
TTCAAAGGAC AATACTCCCC GGGGTTTGAT GTCATCAATG ACCTGCAACG CGTAGGGGTG
GTGAACCAGA CCACTATGCT GGCTACGGAA ACCCAGGCGA TCGCTGATTA TATCAAAAAT
GTAATCATGG ACAGATATAG CCTCGATGCT TCCAATGTCA GTGAACGCTT TGCCGATACC
CGCGATACCC TCTGTTATGC CACCAATGAC AACCAGAGCG CCGTTACCGG TCTGCTGGAA
GAATCTGCCG ACCTGGCGAT TGTTGTGGGC GGTTATAACA GTTCCAATAC TTCTCACCTG
GTAGAACTCT GCGAAGTGAA ACTGCCTACC TATTTCATCT CTTCTGAGGA GAAACTGGTC
AATGCCGAAG AAGTACATCA CTGGGATTTC CATCACAAAC AGGAATTACA CAGCCGGGCT
TTCCTGCCTG AAAAAGAGCA GGTAACCATT ATGCTGACGA GTGGCGCTTC CTGTCCGGAT
GCGATGGTCG AAGCAGTGAT CAGAAGGCTC TTGTCTTTTT ATAAGCTGGA AGATAAAATG
GAAGAAGTAG CAGCGACATT CGAATAA
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| Protein sequence | MKTFNVPIIY RSPLITAIKN RRKQQDRMKK DFTPTVLDFG PLKILLARHF GFCYGVENAI
EIAFKTVEAN PGKRIFLLSE MIHNPHVNND LLEKGVQFIM DTAGTQLVPW ESLTPEDIVI
IPAFGTTLEI EEKLSSLGIA PLQYNTTCPF VERVWNKAEQ IGKQSYSVIV HGKPGHEETR
ATFSHSRSNT PTVVVKDIKE AQLLATFITG EKNPEEFYIL FKGQYSPGFD VINDLQRVGV
VNQTTMLATE TQAIADYIKN VIMDRYSLDA SNVSERFADT RDTLCYATND NQSAVTGLLE
ESADLAIVVG GYNSSNTSHL VELCEVKLPT YFISSEEKLV NAEEVHHWDF HHKQELHSRA
FLPEKEQVTI MLTSGASCPD AMVEAVIRRL LSFYKLEDKM EEVAATFE
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