Gene Cpin_6601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6601 
Symbol 
ID8362789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8276954 
End bp8277775 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content48% 
IMG OID644968733 
Productpurine nucleoside phosphorylase I, inosine and guanosine-specific 
Protein accessionYP_003126206 
Protein GI256425553 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0005] Purine nucleoside phosphorylase 
TIGRFAM ID[TIGR01697] inosine guanosine and xanthosine phosphorylase family
[TIGR01700] purine nucleoside phosphorylase I, inosine and guanosine-specific 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.326925 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.558296 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGATC TCTTACAACA AATAGCTGCA GCTGCGGAGT TTATCCGTAA ATCATGGTCC 
GGTACCCCTG AAGTGGGCAT TATTTTAGGC AGTGGACTGG GCAACCTGAC CAGTGATATT
ACTGACAGCG TTGAAATCCC TTATGAGCAG ATCCCGCATT TTCCGTCCTC TTCCGTGGAA
GGGCATAAAG GCCGCCTGAT ACTGGGTAAC ATGAATGGTC GCCCCGTAGT GGCAATGGCT
GGTCGTTTCC ATTTTTACGA AGGACTGTCC ATGCAGCAGG TCACCTTCCC GGTTAGGGTC
ATGAAAGCCC TCGGGGTGCA TACCCTGCTG GTGTCTAATG CCGCCGGTGG TATGAATAAG
GCATTTAACG TAGGAGATCT GATGATTATC CGCGATCATA TTAATCTGCA GCCGGAGCAT
CCGCTGCGTG GCCCCAATAA CAATACCCTG GGTCCCCGTT TCCCGGATAT GAGCGAACCA
TATTCCAAAG CATTGATTGC CAAAGCAAAA GAAATTGCCG CTGCCAATAG TATTCCTGTA
CATACCGGCG TTTATGTAGG TGTACAGGGT CCTACCTTCG AAACCAGGGC AGAATATATG
TACATGCATA TCATCGGTGG AGACGCCGTA GGTATGAGTA CCGTTCCCGA AGTGATCGTT
GCAATCCATA GCGGTATGAA GGTTTTTGCA ATGAGTGTTA TTACTGATAT CGGGATCCGT
GAAGAGGAAA ATGTGATCAC CCACGAAGAA GTACTGGAAG CTGCCAATGC AGCTGAACCG
AAATTAACCC TTATTTTCAG GGAGCTGATC AAGGTTATAT AA
 
Protein sequence
MSDLLQQIAA AAEFIRKSWS GTPEVGIILG SGLGNLTSDI TDSVEIPYEQ IPHFPSSSVE 
GHKGRLILGN MNGRPVVAMA GRFHFYEGLS MQQVTFPVRV MKALGVHTLL VSNAAGGMNK
AFNVGDLMII RDHINLQPEH PLRGPNNNTL GPRFPDMSEP YSKALIAKAK EIAAANSIPV
HTGVYVGVQG PTFETRAEYM YMHIIGGDAV GMSTVPEVIV AIHSGMKVFA MSVITDIGIR
EEENVITHEE VLEAANAAEP KLTLIFRELI KVI