Gene Cpin_6564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6564 
Symbol 
ID8362749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8232496 
End bp8233257 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content50% 
IMG OID644968693 
ProductCutC family protein 
Protein accessionYP_003126169 
Protein GI256425516 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3142] Uncharacterized protein involved in copper resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.397235 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAAAA AGATCACGCT TGAGATCTGC GCCGGTTCGG TCGCTTCCTG CATCGCTGCA 
GAAGAAGGCG GCGCACACCG TATTGAATTA TGCGACAATC TGCTGGAAGG TGGCACCACC
CCCAGCTATG CAACGATTGC CCTGGCCCGT GAGAAAGTAA AAATAGACCT CTACCCTATT
ATCCGCCCCC GTGGTGGCGA TTTCCTGTAC GATGACCTCG AATTCACCCT CATGCAGAAA
GACATTAAAC TCTGCAAATC CCTGGGATGT AATGGTGTGG TAATCGGTCT GCTGACCACC
GATGGTAAAG TGGATAAAGT ACGTACCAAA GCCCTGGTTG ATCTGGCCTG GCCCATGGGT
GTTACCTTCC ACCGCGCCTT CGATATGACA GAAGACCCGA TGCAGGCACT GGAAGATATC
ATTGAAGCAG GTTGTGAACG TATACTGACC TCCGGTCAGC GGAATACAGC GGTAGAAGGT
ATCCCTTTAC TGAAAACACT GGTGGAAAAA TCTGCCGGAC GTATTGCCAT TCTCGTAGGC
TCCGGTGTAC GGGCGCATAA TATCGCTGAA CTGGTAAAAG AAACAGGCGC TATAGAATTT
CATACGACCG CCAAAGCATA TGAAGAAAGC GGTATGGTGT ACCGTAATCC AAATGTCAGC
ATGGGCGGTA TTCCCGGTGT ACCTGAATAC GGCATTTCAA AAACACAGGT AAGCGAAGTG
AAAAAGATCC TGGCCCTGGC TACTGAAGCC GCCGGTAACT AA
 
Protein sequence
MEKKITLEIC AGSVASCIAA EEGGAHRIEL CDNLLEGGTT PSYATIALAR EKVKIDLYPI 
IRPRGGDFLY DDLEFTLMQK DIKLCKSLGC NGVVIGLLTT DGKVDKVRTK ALVDLAWPMG
VTFHRAFDMT EDPMQALEDI IEAGCERILT SGQRNTAVEG IPLLKTLVEK SAGRIAILVG
SGVRAHNIAE LVKETGAIEF HTTAKAYEES GMVYRNPNVS MGGIPGVPEY GISKTQVSEV
KKILALATEA AGN