Gene Cpin_6563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6563 
Symbol 
ID8362748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8231435 
End bp8232487 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content51% 
IMG OID644968692 
ProductN(4)-(beta-N-acetylglucosaminyl)-L-asparaginase 
Protein accessionYP_003126168 
Protein GI256425515 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1446] Asparaginase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGATC GCAGACATTT CTTAAAAGCA GCGGCCCTCA GTGCCGCTGC TTTATCTTTA 
GATGGTATTA CATCTGAGAA AGCACAGGCA GCTGATGCCT CCAAAGGTAA AGTGACCAAA
CCGATCGTTG TCTCTACATG GGACTTCGGC CGCGCCGCCA ACGAGGCTGC ATGGGACGTA
CTGAAAAAAG GTGGTCGTGC ACTCGACGCC GTTGAAGCCG GCGTAAGAGT ACCGGAAGCT
GACCCTAACA ACCATACCGT AGGATACAGC GGGTTCCCTG ACCGTGATGG TCGTGTAACC
CTCGATGCCT GCATTATGGA TGAACTGGGC AATTGTGGCT CTGTAGCTGC ACTGGAACAC
GTGACACACG CTATCTCCGT AGCCCGTGCC GTAATGGAAA AAACACCACA CGTGATGCTG
GTCGGTGATG GCGCACTCCA GTTCGCCCTT GCCAATGGTT TCAAAAAAGA AAACCTGCTC
ACACCGGAAT CAGAAAAAGC ATGGCGCGAA TGGCTGAAAA AGTCAGAATA CAAGCCGATC
ATGAACATTG AGAACTCCTC CTATGGTCCT GACAAGGCAA CGACTTTCAA CCCGCTTAAA
CTGCCAGGTA ACGTCTACAA CCACGATACC ATCGGTATGG TGGCACTGGA TGCTAACGGT
AACCTGTCCG GCGCCTGTAC GACCAGTGGT ATGGCCTTCA AACTGCATGG CCGCGTAGGC
GACTCTCCCA TCATCGGTGC AGGTCTCTAT GTCGACAATG AAGTAGGCGC TGCTACCTCC
ACCGGTGTTG GTGAAGAAGT GATCCGCGTC GTAGGTAGCT TCCTCGTTGT AGAACTGATG
CGTCAAGGTT ATTCTCCTGA AGCAGCCTGC AAAGAAGCAG TAACGCGTAT CGTAAAGAAG
AATAAAGAAA GAGCAAAAGG CTTACAGGTA GGCTTTCTCG CCATCAACAA AAAAGGCGAA
CACGGCGCAT ACTGCCTGCA GAAAGGATTT AACTATGCTG TGCTCTCCGA AAAGGAAAGC
AACGTCCTGA TAGACGGTAA GCACTATTTC TAA
 
Protein sequence
MQDRRHFLKA AALSAAALSL DGITSEKAQA ADASKGKVTK PIVVSTWDFG RAANEAAWDV 
LKKGGRALDA VEAGVRVPEA DPNNHTVGYS GFPDRDGRVT LDACIMDELG NCGSVAALEH
VTHAISVARA VMEKTPHVML VGDGALQFAL ANGFKKENLL TPESEKAWRE WLKKSEYKPI
MNIENSSYGP DKATTFNPLK LPGNVYNHDT IGMVALDANG NLSGACTTSG MAFKLHGRVG
DSPIIGAGLY VDNEVGAATS TGVGEEVIRV VGSFLVVELM RQGYSPEAAC KEAVTRIVKK
NKERAKGLQV GFLAINKKGE HGAYCLQKGF NYAVLSEKES NVLIDGKHYF