Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6562 |
Symbol | |
ID | 8362747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 8230431 |
End bp | 8231396 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644968691 |
Product | ROK family protein |
Protein accession | YP_003126167 |
Protein GI | 256425514 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | [TIGR00744] ROK family protein (putative glucokinase) |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAGC AATTAGCGGT GGGCATTGAT ATTGGAGGAA CCAATACAAA GTTTGGCATA GTAGATCGCA GAGGTAATAT TCTGTGTGAT GGTCGTATGC TAACGAACCA ACACGAAGAC GTTCATGGCT TCCTGGATGA GTTGCACGAG CATCTCTCCG TATTGATCGC ACAGGTAGGT GGCATTGAAA ACATCAGAGG TATCGGTGTA GGTGCACCAA ATGGTAACTT TTATACCGGT AACATTGAAT ATGCTCCAAA CCTCCGCTGG AAAGGTATTA TACCTTTAGC AAAATTGCTG GGTGAAAAGT TTGGCGTACC GGCTATCCTT ACCAATGACG CTAACGCAGC GGCACTCGGT GAATTCCAGT ACGGTGCTGC AAGAAGCATG AGAGATTTCA TCGTTATCAC GCTGGGTACA GGGGTAGGTA GCGGTATTGT TGCCAACGGT CAGCTGATCT ATGGTCACGA TGGCTTCGCA GGTGAACTCG GTCACTGTAT CGTGATCCCT GGTGGCAGAT ACCATCCTGG TACAGGCGCA CACGGTTCCC TGGAAGCATA TGCTTCTGCA ACCGGTGTAA CCAACACTGC CCTGGAATTC CTGGCTAACC GCCCGGATAC ACAGAGCATC CTGCGTGATC ATTCGAAAGA AGAGATCAAT TCCAAAGTGA TATATGAAGC CGCAATGAAA GGCGATCCGC TGGCAGTAGA AGTATACGAA TTCACCGGTA AAATACTCGG TGAGGCCCTG GCCAACTTTG TCATGTTCTC CAGCCCTGAA GCGATCATCC TGTTCGGTGG TCTGACCAAA GCAGGCGACA TGATCATGAA ACCTGTACGC GAGCATATGG AGAAAAACCT CTTGCCTATC TTCCAGAACA AAGTGAAGCT GGTCTTCTCC GAACTGAAAG AAAGCGATGC GGCTATCCTC GGTGCAAGCG CCCTGGCATG GGAAATGAAA GATTAA
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Protein sequence | MSQQLAVGID IGGTNTKFGI VDRRGNILCD GRMLTNQHED VHGFLDELHE HLSVLIAQVG GIENIRGIGV GAPNGNFYTG NIEYAPNLRW KGIIPLAKLL GEKFGVPAIL TNDANAAALG EFQYGAARSM RDFIVITLGT GVGSGIVANG QLIYGHDGFA GELGHCIVIP GGRYHPGTGA HGSLEAYASA TGVTNTALEF LANRPDTQSI LRDHSKEEIN SKVIYEAAMK GDPLAVEVYE FTGKILGEAL ANFVMFSSPE AIILFGGLTK AGDMIMKPVR EHMEKNLLPI FQNKVKLVFS ELKESDAAIL GASALAWEMK D
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