| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6558 |
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| Symbol | |
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| ID | 8362743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8223321 |
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| End bp | 8225384 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644968687 |
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| Product | coagulation factor 5/8 type domain protein |
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| Protein accession | YP_003126163 |
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| Protein GI | 256425510 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3669] Alpha-L-fucosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00192951 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGGC TTTGCAGCAC GCTGGCCACT GCTCATGCGC AGGACATTGC TCCGTATGGG
GCGCTGCCAT CCAAATCACA GGTGGAGTGG CAGGATATGG AATATTACAT GTTTATCCAC
CTTGGTCCGA ACACCTTTAC AGACAATGAA TGGGGACATG GCGACGAAGA TCCTAAGGTC
TTCAATCCTT CCCAGTTGGA TGCCCGTCAG TGGGCGCGTA CCGCGAAACT CGCCGGTATG
AAAGCGATTA TTATTACTGC GAAGCACCAC GATGGTTTCT GTCTGTGGCC AAGTAAATAC
AGCACCCATA CGGTCAGAGA GAGTGCCTGG AAAGACGGGA AAGGGGATAT CCTGAAGGAA
TTATCCGCCG CCTGTAAGGA GTACGGACTG AAGTTTGGTG TATATCTGTC TCCATGGGAC
CGTAACCACC CTGCTTATGG TACACCGGAG TACAACCAGG TTTTCTCTAA TACATTAAAT
GAAGTGCTGA GCAGCTATGG CCCTGTGTTT GAACAATGGT TTGACGGTGC TAACGGAGAA
GGTCCGAATG GTAAGAAGCC GGTATACGAC TGGCCGCTTT TCCACAGTAC GGTATATAAG
AACCAGCCGA ATGCGGTTAT TTTCAGTGAT GTGGGACCGG GTTGCCGCTG GGTAGGTAAT
GAGGATGGCA TTGCAGGTAC TACGAGCTGG TCTACGCTGA ACGTGACTGG TTTTTCGCCA
GGAAAGGGTG CGCCTCCACA GTCTGTACTG AATGAAGGGA ATATGAACGG AGAGAAATGG
GTACCTTCTG AATGTGATGT GTCTATCCGT CCGGGATGGT TTTATAGTCC GTCTACCAAT
GATAAGGTAA AAAGCGTACA GCAGCTGTTA GATATCTACT ATGGTTCTGT CGGCCGCAAC
GGGAATATGC TGTTGAATGT GCCGGTTGAC CGGAGAGGTC TGATCTATTC AGCGGATTCT
ACCCGTCTGA TGGAGTTCAG GAGAATGCGT GAAGAGAGCT TTAAGACCAA CCTGGCACTG
AAAGCAAAGG TGACAGCCAC AGAAACCCGC AAGGGAAATA CACATGTTAA TGTGCGTAAC
CTGATCGATG GTAAGAATGA CACTTACTGG GCTACGCCGG ATAATGCTTT ACAGGGAACA
ATCACTTTGA CTTTCCCGAA GGCGGTTACA TTCAACCGGC TGGTGATGCA GGAGTATATT
CCGCTTGGCC AGCGTGTGAA GGCGTTTAGC GTGGAAGTGC TGGAGAAAGG GGCGTTTAAG
GAAGTAACGA CAGCTACCAC AATCGGACAT AAGCGTATTC TGTCCTTCCC GGATGTGACC
ACTACGCAGG TGCGTGTGAA GATACTGGAT GCGCTGGCTT GTCCGGTGAT CAGCGAAGTA
CAGCTGTACA AAGCGCCGGG TTTACTGGCG GTACCTGTTA TTAACCGTAA CAAGAACGGC
GATGTGAGCA TTACCTGTTC TTCTCCGGAT CCGGAACTGC ATTATACCCT GGATGGCAGG
GAGCCGACTT TCAAATCACC TAGATATACA GGTTTGATTC CCCTGCCGAA GGGCGGTGTT
ATCAGGGCGA AGTCATTCCT GGAGAAAGGA AAGGTAGCCA GTACAACAAC TACTGTTAGT
TATGATATAG CGCCGGCTAA GTGGAAGGTG ATATATACAG ATGATCAGGC AGCAGGTGCC
GATCCGGAGA GAGCGATTGA CGGCAACCCG AATTCCTTCT GGATGACGAA CTACCAGCCG
GATGCATCAA AATATCCGCA TGAGATCCAG ATAGATATGA ATGAGTCATT GACCCTGAAA
GGGTTTGTGT ATACGCCTAG ACACCAGACG GTACGTTCCG GTACGATCTA TGGCTATGAG
TTTTATGTGA GTGAGGATGG GGAGAACTGG GGCCAGCCTG TGGCACATGG AAACTTTGCG
AACATTGCCA ACAATCCTGT GACGCAGACA ATTAAATTTA ACATTCCTGC AAAAGGACGA
TTTATCCGCC TTGTGGCCAC TACGCCTGCC AATGAAAATG AGCATTGGGC CAGTGTGGCA
GAGCTAGGCG TTATCACTAA ATAA
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| Protein sequence | MAGLCSTLAT AHAQDIAPYG ALPSKSQVEW QDMEYYMFIH LGPNTFTDNE WGHGDEDPKV
FNPSQLDARQ WARTAKLAGM KAIIITAKHH DGFCLWPSKY STHTVRESAW KDGKGDILKE
LSAACKEYGL KFGVYLSPWD RNHPAYGTPE YNQVFSNTLN EVLSSYGPVF EQWFDGANGE
GPNGKKPVYD WPLFHSTVYK NQPNAVIFSD VGPGCRWVGN EDGIAGTTSW STLNVTGFSP
GKGAPPQSVL NEGNMNGEKW VPSECDVSIR PGWFYSPSTN DKVKSVQQLL DIYYGSVGRN
GNMLLNVPVD RRGLIYSADS TRLMEFRRMR EESFKTNLAL KAKVTATETR KGNTHVNVRN
LIDGKNDTYW ATPDNALQGT ITLTFPKAVT FNRLVMQEYI PLGQRVKAFS VEVLEKGAFK
EVTTATTIGH KRILSFPDVT TTQVRVKILD ALACPVISEV QLYKAPGLLA VPVINRNKNG
DVSITCSSPD PELHYTLDGR EPTFKSPRYT GLIPLPKGGV IRAKSFLEKG KVASTTTTVS
YDIAPAKWKV IYTDDQAAGA DPERAIDGNP NSFWMTNYQP DASKYPHEIQ IDMNESLTLK
GFVYTPRHQT VRSGTIYGYE FYVSEDGENW GQPVAHGNFA NIANNPVTQT IKFNIPAKGR
FIRLVATTPA NENEHWASVA ELGVITK
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