Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6557 |
Symbol | |
ID | 8362742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 8222047 |
End bp | 8222871 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644968686 |
Product | hypothetical protein |
Protein accession | YP_003126162 |
Protein GI | 256425509 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0139497 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACAAAAT TGGAAAATCC GAATATCATT GTCAGGGTCG CGACCACTGA CGATAAGCAT TATGGCAAAA CCATCACAGA TGAGATGGAG GCTTCCGCAA AAGCGCGTGG AACAGGTATT GCCAAACGTT CTCCCGAGTA TGTACAACTG AAGATGGAGG AGGGTAAGGC TGTTATAGCA TTAACAGATA AAGGCGAATG GGTAGGCTTC TGCTATATAG AGGCCTGGGG ACATGAGAAA TTTGTGGCCA ACTCAGGATT GATCGTCAAC CCTGCATTCA GAGGACATGG GGTGGCAAAG GCTATTAAAC ACCGTGTATT TGAATTGTCC AGAGAGAAGT ATCCGGATGC GAAAATATTT GGTCTGACTA CCGGTCTTGC GGTGATGAAG ATCAACTCCG AACTGGGCTA TGAGCCAGTG ACTTATTCAG AGCTGACAGA CGATGAAGAG TTCTGGAAAG GTTGCCGCAG CTGTGTCAAT TTTGAAGTGC TGACGAGTAA GAATCGTAAG AACTGTCTGT GTACGGCAAT GCTGTACGAT CCGGTGGAGA AGGCGAAAGA AGAGGCTGAA AGAGAAGCGC TGAAAAAGGC TGCCCTGCAT ATCCAGACGG ATGCTTTAGG CGCTGCTCAG CCGCAGATCC TGGTGGCAGC GAATGGGGAG ATCAAACACG CAAAGAAAGC AAGGAAGTTC AAGGAGAATT TCAAGCTGTT TGAAAGATGG CTGCGCTTTA AAAGATTCGT ACTGCTGAAA AGCGGTAAGG ATAGCATCAG TGGTGGCGGA GCGCCATCCA GCAGAAAGCG TTTCTTTCTG TTCAACATAT TGTAA
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Protein sequence | MTKLENPNII VRVATTDDKH YGKTITDEME ASAKARGTGI AKRSPEYVQL KMEEGKAVIA LTDKGEWVGF CYIEAWGHEK FVANSGLIVN PAFRGHGVAK AIKHRVFELS REKYPDAKIF GLTTGLAVMK INSELGYEPV TYSELTDDEE FWKGCRSCVN FEVLTSKNRK NCLCTAMLYD PVEKAKEEAE REALKKAALH IQTDALGAAQ PQILVAANGE IKHAKKARKF KENFKLFERW LRFKRFVLLK SGKDSISGGG APSSRKRFFL FNIL
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