Gene Cpin_6557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6557 
Symbol 
ID8362742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8222047 
End bp8222871 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content47% 
IMG OID644968686 
Producthypothetical protein 
Protein accessionYP_003126162 
Protein GI256425509 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0139497 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACAAAAT TGGAAAATCC GAATATCATT GTCAGGGTCG CGACCACTGA CGATAAGCAT 
TATGGCAAAA CCATCACAGA TGAGATGGAG GCTTCCGCAA AAGCGCGTGG AACAGGTATT
GCCAAACGTT CTCCCGAGTA TGTACAACTG AAGATGGAGG AGGGTAAGGC TGTTATAGCA
TTAACAGATA AAGGCGAATG GGTAGGCTTC TGCTATATAG AGGCCTGGGG ACATGAGAAA
TTTGTGGCCA ACTCAGGATT GATCGTCAAC CCTGCATTCA GAGGACATGG GGTGGCAAAG
GCTATTAAAC ACCGTGTATT TGAATTGTCC AGAGAGAAGT ATCCGGATGC GAAAATATTT
GGTCTGACTA CCGGTCTTGC GGTGATGAAG ATCAACTCCG AACTGGGCTA TGAGCCAGTG
ACTTATTCAG AGCTGACAGA CGATGAAGAG TTCTGGAAAG GTTGCCGCAG CTGTGTCAAT
TTTGAAGTGC TGACGAGTAA GAATCGTAAG AACTGTCTGT GTACGGCAAT GCTGTACGAT
CCGGTGGAGA AGGCGAAAGA AGAGGCTGAA AGAGAAGCGC TGAAAAAGGC TGCCCTGCAT
ATCCAGACGG ATGCTTTAGG CGCTGCTCAG CCGCAGATCC TGGTGGCAGC GAATGGGGAG
ATCAAACACG CAAAGAAAGC AAGGAAGTTC AAGGAGAATT TCAAGCTGTT TGAAAGATGG
CTGCGCTTTA AAAGATTCGT ACTGCTGAAA AGCGGTAAGG ATAGCATCAG TGGTGGCGGA
GCGCCATCCA GCAGAAAGCG TTTCTTTCTG TTCAACATAT TGTAA
 
Protein sequence
MTKLENPNII VRVATTDDKH YGKTITDEME ASAKARGTGI AKRSPEYVQL KMEEGKAVIA 
LTDKGEWVGF CYIEAWGHEK FVANSGLIVN PAFRGHGVAK AIKHRVFELS REKYPDAKIF
GLTTGLAVMK INSELGYEPV TYSELTDDEE FWKGCRSCVN FEVLTSKNRK NCLCTAMLYD
PVEKAKEEAE REALKKAALH IQTDALGAAQ PQILVAANGE IKHAKKARKF KENFKLFERW
LRFKRFVLLK SGKDSISGGG APSSRKRFFL FNIL