Gene Cpin_6555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6555 
SymbolargC 
ID8362740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8219771 
End bp8220754 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content45% 
IMG OID644968684 
ProductN-acetyl-gamma-glutamyl-phosphate reductase 
Protein accessionYP_003126160 
Protein GI256425507 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0002] Acetylglutamate semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01850] N-acetyl-gamma-glutamyl-phosphate reductase, common form 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.328202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAATG ACAAAAAGAT AAAAGCAGGG ATTATAGGTG GCGCAGGTTA TGGCGGTGGT 
GAAATGATCC GTCTTTTATT GAATCATCCC AACGTAGAGA TTTCTTATGT ACATAGCCGG
AGTAACGCCG GCAATCCCCT TTACGCAGTA CATGCCGACC TGCTGGGGGA AACTGAACTG
ACCTTTACAG GAGAAATGAG CAACGATATC GATGTATTGT TTCTTTGTCT GGGTCACGGA
GAAGCAAAGA AATTCGTGGA AGCAACAGAT ATCGCAGCAT CGATAAAAAT CATCGATCTT
AGCCAGGACT TCAGGCTGGG AGAGACGGTA AAGGGCCGCG AGTTTGTATA CGGTCTTCCC
GAAATGCAAC GAGAAAAGAT CATTACTGCA AATAATATTG CCAACCCTGG TTGTTTTGCA
ACAGGTATAC AGTTAGGATT GTTGCCGCTG GCCAAAGCGG GTTTGCTGCA GGAAGTACAT
ACTACCGGTA TTACAGGATC CACCGGTGCA GGACAGAGTT TACAGGCGAC TTCACATTTT
ACCTGGAGGG CCAATAACAT CTCTACCTAC AAAGTACTGA GCCATCAGCA TCTGAAAGAA
ATACGACGAA GCCTGCAGCT GTTGCAGCCT TCCTTTACCG GAGACGTCAA CTTCGTACCG
GTTCGCGGAG ATTTTCCAAG AGGTATCTGG GTAACCTCTT ACCTGCAGAG CGACTTATCG
CTTGAAGAAG CGCAGCAGCT GTATAAAGAC TACTACGCAG GCCATCCATT TACACATGTA
AGTGATAAGC AGATCGACCT GAAGCAGATC GTAAACACCA ATAAATGTTT AATCCAACTT
GAAAAAGTAG GTAACAAACT GGTGATTCAT TCCATCGAAG ATAATCTGCT GAAAGGTGCA
TCAGGACAGG CGGTTCAGAA TATGAACCTT CTGTTTGGAT TTGATGAAAC TGCTGGTTTG
AAGCTGAAGT CTATCGTATT CTAA
 
Protein sequence
MANDKKIKAG IIGGAGYGGG EMIRLLLNHP NVEISYVHSR SNAGNPLYAV HADLLGETEL 
TFTGEMSNDI DVLFLCLGHG EAKKFVEATD IAASIKIIDL SQDFRLGETV KGREFVYGLP
EMQREKIITA NNIANPGCFA TGIQLGLLPL AKAGLLQEVH TTGITGSTGA GQSLQATSHF
TWRANNISTY KVLSHQHLKE IRRSLQLLQP SFTGDVNFVP VRGDFPRGIW VTSYLQSDLS
LEEAQQLYKD YYAGHPFTHV SDKQIDLKQI VNTNKCLIQL EKVGNKLVIH SIEDNLLKGA
SGQAVQNMNL LFGFDETAGL KLKSIVF