Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6551 |
Symbol | |
ID | 8362736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 8215723 |
End bp | 8216787 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644968680 |
Product | peptidase M20 |
Protein accession | YP_003126156 |
Protein GI | 256425503 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGAACC AAAAACTGTA TGATGATGCA GTAACATTAT TAAAAGGGCT GATCTCCATT CCTTCTCTGA GCAGGGAAGA ACAGGGGACT GCACAACTGA TCGCTGATTT TCTCAAAGAA AGGAATATTC CTCATCAGCA ACATCTGAAT AATATCTGGG CAAAGAACAA GCACTTTGAT CCTGCAAAGC CCGTAATTGT ATTTAATTCT CACCACGATA CCGTTAAGCC TAACCCGCAA TACACACGCG ACCCTTTTTC TCCTGATGTA GCTGATGGCA AACTGTATGG CCTGGGCAGT AATGACGCCG GTGGATGCCT GGTAAGTCTG ATCGCCACTT TCCTGCATTT TTACGAACGC AGCGATATGG CCTACAACAT CGTACTGACG GCAACAGCAG AAGAAGAGAT CAGCGGTGTA AATGGTATTG AAAGTATACT TTCACAGCTT CCCGCTATTG AATTTGCTAT TGTAGGAGAA CCTACGCAGA CACAGCTGGC AACTGCCGAA AAAGGACTGA TGGTGCTGGA TTGTACCGTA ACCGGTAGAG CTGGTCATGC GGCGCGTGAT GAAGGAGAGA ATGCGCTTTA TAAAGCAATG CCCGATCTGG AATGGTTCCG TACTTTCCAT TTTCCAAAGG TATCTGACAC ACTGGGCCCT GTTAAAATGA GTGTGACAGT AATCAATACT TCCAATAAAG CACATAACGT CGTACCGGCT GATTGTACCT TTGTAGTAGA TGTGCGCGTG ACGGAACAAT ATACACTGGA AGAAGTGCTG GAGATCATCC GCGCTAATGT ACAGTGTGAT GTAAAGCCAC GTTCCCTGCG TATGCGTCCT TCCGGTATTC CGCCGGAGCA TCCGTTTGTA CAGGCAGGAC TGCGTCATGG CAAAACAACT TATGGTTCGC CGACTACTTC TGATCAGGCA CTGATACCAG GTACTTCCAT CAAAATGGGA CCTGGCGATT CGGCCCGTTC ACATACAGCG GACGAATACA TTTACCTTGA TGAAGTACGT CAGGGTATTG ACAGTTATAT TAAATTACTC GAAGAAATCT TGTAG
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Protein sequence | MWNQKLYDDA VTLLKGLISI PSLSREEQGT AQLIADFLKE RNIPHQQHLN NIWAKNKHFD PAKPVIVFNS HHDTVKPNPQ YTRDPFSPDV ADGKLYGLGS NDAGGCLVSL IATFLHFYER SDMAYNIVLT ATAEEEISGV NGIESILSQL PAIEFAIVGE PTQTQLATAE KGLMVLDCTV TGRAGHAARD EGENALYKAM PDLEWFRTFH FPKVSDTLGP VKMSVTVINT SNKAHNVVPA DCTFVVDVRV TEQYTLEEVL EIIRANVQCD VKPRSLRMRP SGIPPEHPFV QAGLRHGKTT YGSPTTSDQA LIPGTSIKMG PGDSARSHTA DEYIYLDEVR QGIDSYIKLL EEIL
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