Gene Cpin_6546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6546 
Symbol 
ID8362731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8209306 
End bp8209698 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content49% 
IMG OID644968675 
Productsingle-strand binding protein 
Protein accessionYP_003126151 
Protein GI256425498 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAGC TACAATTAAT CGGGCATCTG GGACATGATG CAGTTCAGCG GAATGTAAAT 
GGTCATACTG TTTTAGGCTT TCGCGTGGCG CATACGGAGC GCTTTAAGGC GCGGGATGGT
GAGTTGCAGG AAAGGACGAC CTGGGTAGAT TGTTCGCTCT GGAACAAGGA GAAGGTGGGT
CCTTATCTGA AAACGGGTAC CCGTGTGTTT GTCGAGGGAA ATCCTTCGGC AGATAATTAT
GTGAACGGCC AGGGTGAAAA TGTGTCGGTA TTGCGTTTAA AAGTCTTGCA ATTGCAGCTG
TTGACGAGTC GCCGTGATGG TGGTAAGCGG GAAAATGAGG TGGAGGAGAT TGTGATGGTG
AATGAAGATC CGGCGGATGA TCTGCCGTTT TAG
 
Protein sequence
MIKLQLIGHL GHDAVQRNVN GHTVLGFRVA HTERFKARDG ELQERTTWVD CSLWNKEKVG 
PYLKTGTRVF VEGNPSADNY VNGQGENVSV LRLKVLQLQL LTSRRDGGKR ENEVEEIVMV
NEDPADDLPF