| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6540 |
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| Symbol | |
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| ID | 8362724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8204031 |
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| End bp | 8205638 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644968668 |
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| Product | carboxyl-terminal protease |
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| Protein accession | YP_003126145 |
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| Protein GI | 256425492 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.114224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.688204 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTATGT CGAACAGGAA ACTGAATGTT TTTTTACCTC TCTTATTTGC GATAGTACTG
GCATTGGGAA TGTATCTGGG GCACAAAATG CCAGGCGCCA ATACAGGGGC GCAGACCTTA
CTATTCACCC GGCCCAGCCG GGCTCCGCTC CAGGAAGTCA TGGATCTGCT GAAAATAAAA
TACGTAGATA CCTTAAAGGT AGACGATCTT CAGGAGGAAG CCATCCAGGG ACTGCTGAGC
CACCTGGATC CACACTCTAT CTACATACCG CCCTCCAATC TGCAAACCGT GAATGAAGAC
CTCGAAGGTC ATTTCTCCGG TATCGGTGTG GAATTCAATA TCATCGCTGA CACGGTGAAC
GTAGTATCCG TTGTTTCCGG CGGTCCGTCA GAAACAGCAG GCGTACAAAC AGGTGATAAG
ATCATTAAGG TAAACGACTC CCTGGTGGCA GGCAACAACA TCTCCGGCGA TAAGATCAGA
AAACTGTTAC GGGGCCCGAA AAACTCAAAA GTGACAGTTA CCATGCTCCG CCAGCAGAAA
ATGACACCTA TTCAGATCAT CCGCGGCGAT ATCCCATTAT ATAGCATCGA CGCCTCTTAT
ATGGTTTCTC CGGAAATCGG CTATATCAAA ATCAACAAGT TCGCCGGTAC CACCTACCAG
GAGTTCATGG ACGCCATGCG CAAACTGACC AAGGCGGGTA TGACCAAACT GGTGATCGAC
CTGCGTCAGA ATCCGGGCGG TTATCTGGAT GCCGCTACCC GTATCGCAGA CGAACTGCTG
GATGATAACA AACTGATCGT ATATACAAAA GGGAAAAGCT ACCCGCGTTC GGACTACCGT
TGTGAAAAAC CAGGGCTGTT TGAAAAAGGC GGACTGACCA TCCTGACAGA CGAAGGTTCT
GCCAGTGCCA GTGAAATTCT CGCAGGTGCC GTACAGGAAT GGGACCGTGG CACCATTATC
GGTCGCCGTA CCTTTGGTAA AGGTCTCGTA CAGGAACAGT TTGACCTGAG TAATGGCGGT
GCACTACGTC TGACCGTAGC GCGATACTAC CTCAACTCCG GCAGAAGCAT CCAGAAATCT
TACGCGGAAG GTCGTGAAGC TTATGATGAT GATATCATGA ACCGCTTCAA CCATGGTGAA
TTTGTTAACA GCGATAGCAT CCACCAGTTA GATACGATTC AGTTCAAAAC TGCCAGCGGC
CGTGTTGTAT ATGGCGGAGG CGGTATCACA CCGGACATCT TCATGCCGTT TGACACCAGC
CGTTTCTCCA ATGTGCTGAC CAGCATGTAT TCCCGTAGTA CATTCAGCAA TTTCACTTAC
CAGTACTTCA GCAGCCATAA AGACGAGTTC AAACGTTATA AGGACGCTAC TGATTTCAGC
AACCAGTTCC AGGTATCCAA TGAACTGTAC AATGCTTATA AAGCATTTGC GGTGAAAGAC
AGTATCCGTG GTGTTGAATC TATCAAACCG CACGATGAAA ATGAGATCAA AACACGTCTG
AAAGCATTAC TGGCCAGACA GATGTGGAGT TATGCAGGTT TTTATGAGTC GCTGAATAAG
GATGATGAAA TGATGAAAAA GGCGATACAG GTGCTGAATA AAAAATAG
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| Protein sequence | MIMSNRKLNV FLPLLFAIVL ALGMYLGHKM PGANTGAQTL LFTRPSRAPL QEVMDLLKIK
YVDTLKVDDL QEEAIQGLLS HLDPHSIYIP PSNLQTVNED LEGHFSGIGV EFNIIADTVN
VVSVVSGGPS ETAGVQTGDK IIKVNDSLVA GNNISGDKIR KLLRGPKNSK VTVTMLRQQK
MTPIQIIRGD IPLYSIDASY MVSPEIGYIK INKFAGTTYQ EFMDAMRKLT KAGMTKLVID
LRQNPGGYLD AATRIADELL DDNKLIVYTK GKSYPRSDYR CEKPGLFEKG GLTILTDEGS
ASASEILAGA VQEWDRGTII GRRTFGKGLV QEQFDLSNGG ALRLTVARYY LNSGRSIQKS
YAEGREAYDD DIMNRFNHGE FVNSDSIHQL DTIQFKTASG RVVYGGGGIT PDIFMPFDTS
RFSNVLTSMY SRSTFSNFTY QYFSSHKDEF KRYKDATDFS NQFQVSNELY NAYKAFAVKD
SIRGVESIKP HDENEIKTRL KALLARQMWS YAGFYESLNK DDEMMKKAIQ VLNKK
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