| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6535 |
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| Symbol | sdhA |
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| ID | 8362719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8198672 |
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| End bp | 8200645 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644968663 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_003126140 |
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| Protein GI | 256425487 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01811] succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.064478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.326104 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAACT CAAAAATTCC TGCCGGTTCA TTAGACAAGA AATGGGAAGA TTATAAAGGC
CATTGTAAGC TGGTAAACCC GGCTAACAAG CGCAACATGG AAGTGATCAT AGTGGGTACC
GGTCTGGCAG GGGCTTCTGC CGCTGCATCT CTGGGAGAGT TAGGCTATAA AGTGAAGGCT
TTCTGCTTTC AGGATAGCCC ACGCCGTGCG CACAGTATTG CTGCGCAGGG TGGTATCAAC
GCTGCAAAGA ATTACCAGAA CGACGGTGAC TCCGTGTTCC GTCTGTTTTA TGATACTGTA
AAAGGTGGCG ACTACCGTGC CCGCGAAGCA AACGTGCATC GTCTGGCAGA AGTGAGTGGC
AATATCATCG ACCAGTGCGT GGCTCAAGGT GTTCCTTTCG CCCGCGAATA TGGTGGATTA
CTCAGCAACC GCTCTTTCGG TGGTACTCAG GTACAGCGTA CCTTCTACGC TGCCGGTCAG
ACCGGTCAGC AGCTGCTGCT AGGCGCATAC TCCGCACTGG AACGCCAGGT AGCTTTAGGT
AACGTAACCA TGTACAACCG TCATGAAATG CTTGAAGTGG TAACGATAGA TGGTAAGGCA
CGTGGTATCA TTGCCCGTGA TCTGATCACC GGTAAACTGG AGCGTCACTT CGGCCATGCT
GTACTGCTGT GTACAGGTGG TTATGGTAAC GTGTTCTACC TGTCCACAAA CGCAATGGGG
TCTAACGTAA CTGCTGCCTG GAAAGCTACC CGTAAAGGTG CTTACTTCGG TAACCCTTGT
TACACACAGA TTCACCCGAC CTGTATCCCT GTTTCCGGAG ATCATCAGTC TAAACTGACC
CTGATGTCCG AGTCACTGCG TAACGATGGT CGTATATGGG TGCCTAAAAA ACAGAACGAC
AACCGTAAAG CTGCTGATAT TCCTGAAGAA GAGAGAGACT ACTACCTGGA AAGAAGATAT
CCGGCCTTCG GTAACCTGGT ACCACGTGAC GTGGCATCCC GCGCTGCGAA GGAAAGATGT
GATGCCGGTT ATGGTGTAGG TAGCTCCAAA CAGGCGGTAT ACCTCGACTA CGCTGCTGCG
ATCGAACGTT ACGGTAAAAT CGAAGCAAAC AAACGTCAGA TGCACAATGC TTCTGTCGCT
GAAATAACTA AACTGGGTAA AGAAGTAGTT GCTGAGAAAT ACGGTAACCT CTTCGATATG
TACGCCAAGA TCACCGGTGA GAACCCATAC GAAGTGCCAA TGCGTATCTA TCCTGCGGTT
CACTATACAA TGGGTGGCCT CTGGGTGGAC TATGAACTGA TGACTTCTAT CACTGGTCTG
TACGCACTGG GTGAAGCTAA CTTCTCTGAC CACGGTGCAA ACCGTCTCGG TGCTTCCGCA
CTGATGCAGG GTCTGGCTGA TGGTTACTTC GTTATTCCTT ACACACTGGG TAATTACCTG
GCAGATGATA TCAGAACGAA AGCAATCCCA ACTGACCACC CTGCTTTCGT TGAAGCAGAG
AAGCATGTAC AGGATACTAT CAATCAGCTG ATGAATATCA AGGGTACCAA ATCCGTAGAC
CACTTCCACA AGAAACTGGG CAAGATCATG TGGGATAAAT GCGGTATGGC GCGTAACGAA
CAGGGTCTGA AAGAGGCAAT CGTTGAAATT CAGCAATTGC GCGCAGAGTT CTGGAAAGAT
GTACGTATCC CTGGCGATGC AAACGAGTTT AACCCTGAAC TGGAGAAAGC AGGCCGTGTG
GCTGACTTCC TGGAACTGGG AGAACTGATG TGCGTAGATG CATTAAACCG TCGTGAATCC
TGCGGAGGTC ACTTCCGTGA GGAATCTCAG ACACCAGACG GTGAAGCACA ACGTGATGAC
GATAACTTTG CTTACGTAGC TGCATGGGAA TATAAAGGAC CTAGCCAGTT TGAGCTGCAC
AAAGAAGCAC TTGAGTTCGT AGAATGTAAA CCAACTCAAC GTAGCTATAA ATAA
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| Protein sequence | MLNSKIPAGS LDKKWEDYKG HCKLVNPANK RNMEVIIVGT GLAGASAAAS LGELGYKVKA
FCFQDSPRRA HSIAAQGGIN AAKNYQNDGD SVFRLFYDTV KGGDYRAREA NVHRLAEVSG
NIIDQCVAQG VPFAREYGGL LSNRSFGGTQ VQRTFYAAGQ TGQQLLLGAY SALERQVALG
NVTMYNRHEM LEVVTIDGKA RGIIARDLIT GKLERHFGHA VLLCTGGYGN VFYLSTNAMG
SNVTAAWKAT RKGAYFGNPC YTQIHPTCIP VSGDHQSKLT LMSESLRNDG RIWVPKKQND
NRKAADIPEE ERDYYLERRY PAFGNLVPRD VASRAAKERC DAGYGVGSSK QAVYLDYAAA
IERYGKIEAN KRQMHNASVA EITKLGKEVV AEKYGNLFDM YAKITGENPY EVPMRIYPAV
HYTMGGLWVD YELMTSITGL YALGEANFSD HGANRLGASA LMQGLADGYF VIPYTLGNYL
ADDIRTKAIP TDHPAFVEAE KHVQDTINQL MNIKGTKSVD HFHKKLGKIM WDKCGMARNE
QGLKEAIVEI QQLRAEFWKD VRIPGDANEF NPELEKAGRV ADFLELGELM CVDALNRRES
CGGHFREESQ TPDGEAQRDD DNFAYVAAWE YKGPSQFELH KEALEFVECK PTQRSYK
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