| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6529 |
|---|
| Symbol | |
|---|
| ID | 8362713 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 8191745 |
|---|
| End bp | 8192467 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644968657 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003126134 |
|---|
| Protein GI | 256425481 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.557479 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0666444 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGTTT ATATGCAACA GGTCAATAAG GACCTCAGAA CATGGCAGAA GGCCATGCAG
CGCGGCATTA GCCTGCCGGG CAGACTCACC CGCGGGGTCC AGAAAAAGAT CAATAAGGTC
ATTCCTGAGA AGGTACACCG TGCCATGACG GCCGCCATCA AACAAATGAC CAGGGGCGTG
ATCTCAGGCG CCGGCTTTAC CAGTCCGGCG CCGGTCTACG AACATGACCT GGCCGTCAGG
GAAAGCAGGG TCCGTTCCAG GATTGAATTC TATAAAACAA CCGCCGCTAC CGAAGGAGCT
CTGACCGGCG CCGGTGGTAT TCTCTTAGGA CTGGCCGATT TCCCCCTCTT TCTGACTATC
AAAATGAAAA TGCTGTTTGA CCTTGCCGCC CTTTACGGCT ACAACACAGA CGACTATAAA
GAGCGGCTAT TCATTCTTCA CATATTTTTC ATCACCTTTT CCACACAGGA TTTCCGTAAT
AAACTCTATC CCCTCATTGC TGACTGGGAC AATTACAGCC GGGACCTGCC GGAAGATATC
CACGCCTTTG ACTGGCGTAA CTTCCAGCAG CAATACCGGG ATTACCTGGA TGTCGCCAAA
TTGCTGCAAT TAATGCCTGT AATCGGCGCA GCTGTAGGCG CTTATGTGAA TCACCGGCTG
ACCGACAAAC TGGGTAAGAG CGCTATGAAT GCCTACAGAC TACGACTGTT GAAACAGTTA
TGA
|
|---|
| Protein sequence | MDVYMQQVNK DLRTWQKAMQ RGISLPGRLT RGVQKKINKV IPEKVHRAMT AAIKQMTRGV
ISGAGFTSPA PVYEHDLAVR ESRVRSRIEF YKTTAATEGA LTGAGGILLG LADFPLFLTI
KMKMLFDLAA LYGYNTDDYK ERLFILHIFF ITFSTQDFRN KLYPLIADWD NYSRDLPEDI
HAFDWRNFQQ QYRDYLDVAK LLQLMPVIGA AVGAYVNHRL TDKLGKSAMN AYRLRLLKQL
|
|---|
| |