| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6525 |
|---|
| Symbol | |
|---|
| ID | 8362709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 8187342 |
|---|
| End bp | 8188067 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644968653 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003126130 |
|---|
| Protein GI | 256425477 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.679921 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0969772 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTACCGA ATATATCTTT AGATCAGTTA CTGTTGCTTG ATATTGAGAC AACTCCTGCT
GTAGCGACTT TTAATAATTT ACCTGACAAT ATGCAGTCGC TCTGGACGGA CAAAATTGCA
AAAACTTTGC CAGAATCAGG GGACGCGACA GAAGCATACG CAGAGCGGGC AGGGATCTAT
GCCGAATTCG GCAAAATTGT TTGTATTTCA GTGGGTTTCT TTTACGTGGA AAATGGTCGT
TATCAGCTTC GTATAAAATC CATCCATGGT GACGATGAAA AAGTTTTATT AAACAGTTTT
TTAGAATTAG TAAATAAATT TCATACGAAG TTTCCACGAT TTCAGTTTGC CGGGCACAAT
ATCAAAGAAT TTGATATTCC TTTTATTTGC AGGCGATCTG TCATTCATCA GCTATCTTTG
CCGCTGCCTT TACAGATACA CGGCTTCAAA CCCTGGGAGC TGCCTATGTT GGATACCATG
CAGTTATGGC GTTTCGGAGA TTTTAAGAAT TATACTTCCC TGAAACTGCT GACGGCAATC
ATGGGTATTC CGACACCAAA AGACGATATT GACGGTAGTA TGGTAGGCCG GGTATACTGG
CAGGATCATG ACCTGGATAG AATAGCCAGT TATTGCCAGA AAGACGTGGT AGCCGTAGGG
CAGCTGCTGA TGCGCTTCAA GGGAGTACCT CTGCTGGAAG CAGAAGACGT AGTATATACA
AAATAA
|
|---|
| Protein sequence | MLPNISLDQL LLLDIETTPA VATFNNLPDN MQSLWTDKIA KTLPESGDAT EAYAERAGIY
AEFGKIVCIS VGFFYVENGR YQLRIKSIHG DDEKVLLNSF LELVNKFHTK FPRFQFAGHN
IKEFDIPFIC RRSVIHQLSL PLPLQIHGFK PWELPMLDTM QLWRFGDFKN YTSLKLLTAI
MGIPTPKDDI DGSMVGRVYW QDHDLDRIAS YCQKDVVAVG QLLMRFKGVP LLEAEDVVYT
K
|
|---|
| |