Gene Cpin_6522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6522 
Symbol 
ID8362706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8184116 
End bp8185294 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content48% 
IMG OID644968650 
ProductPhosphoribosylformylglycinamidine cyclo-ligase 
Protein accessionYP_003126127 
Protein GI256425474 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0150] Phosphoribosylaminoimidazole (AIR) synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.476681 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.240405 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATCAGA ATATCTACGC GCAGCGCGGC GTTTCAGCCG GAAAAGAGGA TGTGCACAAT 
GCTATTAAGC ATATTGACAA GGGACTGTTT CCGAAGGCTT TCTGTAAAAT AGTGCCCGAT
ATCCTGGGCG GACAGGAAGA ATATTGCAAT ATCATGCATG CTGACGGAGC CGGCACCAAA
TCCTCCCTGG CTTATACTTA CTGGAAAGAA ACAGGTAACC TGGACGTATG GAGAGGCATT
GCCCAGGATG CTATCATCAT GAATATTGAT GATCTGCTTT GTGTGGGCGC TACCGAAAAT
ATCCTGCTCT CTTCCACTAT CGGCCGTAAC AAACAGCTGA TCCCGGGTGA GGTAATTGCA
GCGATCATCA ACGGTACAGA AGAGATCCTG GAAGAACTGC GTAATCATGG TATCAGCATT
CACTCTACCG GTGGCGAAAC CGCAGATGTG GGTGACCTGG TGCGTACCAT TATCGTGGAT
TCAACTGTGA CCTGCCGTAT GAAAAGATCC GAAGTGATCT CTAATCATAC TATACAGGCG
GGTGATGTGA TCGTCGGACT GTCTTCCTAC GGACAGTCAT CTTACGAGAA ATCTTACAAC
GGCGGTATGG GTAGCAATGG GCTGACCTCT GCACGTCATG ACGTATTCAA TAAACAAGTG
GCCGGGAAAT ATCCTGAAAG CTTCGACCCG GGTATTCCTG CTGATCTGGT ATTCAGTGGT
AAAAAAGCCC TGACAGACAA AATCGATGTT CCTGGTTTTG GTCAGATAGA TGCTGGTCGT
CTGGTATTAT CACCAACACG CACTTATGCA CCGGTGATCA AAAAGATACT GGAAGCCTAT
CGTTCCCGCA TACACGGAAT GGTGCATTGT AGTGGTGGTG CGCAGACAAA AGTTTTGCAC
TTCATCGACA ACCTGCATGT GATCAAAGAT AACCTCTTCC CGATCCCGCC ATTGTTCCAG
CTGATCCAGG AACAGTCAGG TACCGGATGG AAAGAGATGT ACCAGGTATT CAACATGGGG
CACCGTATGG AACTTTATGT ACCGGAGGAG ATCGCGGCAG ATATTATTAA GATCAGCCAG
GGCTTTAATA TCGAAGCACA GATCGTAGGC CGTGTAGAAC CTGCCGCTGT TAAACAGGTG
ACTGTACGCA GTGAGAAAGG TGAGTTTGTC TATAATTAA
 
Protein sequence
MDQNIYAQRG VSAGKEDVHN AIKHIDKGLF PKAFCKIVPD ILGGQEEYCN IMHADGAGTK 
SSLAYTYWKE TGNLDVWRGI AQDAIIMNID DLLCVGATEN ILLSSTIGRN KQLIPGEVIA
AIINGTEEIL EELRNHGISI HSTGGETADV GDLVRTIIVD STVTCRMKRS EVISNHTIQA
GDVIVGLSSY GQSSYEKSYN GGMGSNGLTS ARHDVFNKQV AGKYPESFDP GIPADLVFSG
KKALTDKIDV PGFGQIDAGR LVLSPTRTYA PVIKKILEAY RSRIHGMVHC SGGAQTKVLH
FIDNLHVIKD NLFPIPPLFQ LIQEQSGTGW KEMYQVFNMG HRMELYVPEE IAADIIKISQ
GFNIEAQIVG RVEPAAVKQV TVRSEKGEFV YN