Gene Cpin_6519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6519 
Symbol 
ID8362703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8181423 
End bp8182115 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content47% 
IMG OID644968647 
ProductABC transporter related 
Protein accessionYP_003126124 
Protein GI256425471 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG2884] Predicted ATPase involved in cell division 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.144952 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAC AACCGATTAT ACAATTATCC AATGTGAATA TCTACCAGGG AACTTCCCTG 
ATCCTTGCTG ACGTGAATAT TACGGTGAAC AAAGGAGAAT TTGTATACCT GATAGGCCGT
ACGGGAACCG GTAAATCCAG TCTGCTGAAA ACGCTTTACG GAGATCTGTC ACTGAAAGAA
GGGGCCGGTC AAGTAGTGGG TTTTGATCTG AAAAAGATGG ACTGGAAGAA AGTGCCTTAT
CTGCGTCGTA ATCTGGGGGT AGTGTTCCAG GATTTTCAGT TACTGACGGA CAGGACGGTG
CAGGACAACC TGAAGTTTGC TTTGAAGGCG ACGGGTTGGA CGGACAATAA GAAGATGGAG
GAGAAGATCA ATGATGTGCT GGATAAAGTG GGATTGAACA CAAAAGGTTT TAAAATGCCT
TATGAACTGA GTGGCGGTGA GCAGCAGCGT GTGGATATCG CCCGTGCGAT GCTCAATTCT
CCTAAACTGA TCCTGGCGGA TGAGCCGACC GGTAACCTGG ACCCGGAAAC TTCTGACGGC
ATCATGCAGT TGCTGTTCAG GATCAGCAGG GAAGAAGGGG CTGCCGTTGT AATGGCCACA
CATGATTATA TATTATTACA GAAATTCCCT TCCAGGGTAT TACGAACCGA AAATGGCAAG
GTGACTGACC ACGCAAGTGT TACCTTTGTA TAA
 
Protein sequence
MTEQPIIQLS NVNIYQGTSL ILADVNITVN KGEFVYLIGR TGTGKSSLLK TLYGDLSLKE 
GAGQVVGFDL KKMDWKKVPY LRRNLGVVFQ DFQLLTDRTV QDNLKFALKA TGWTDNKKME
EKINDVLDKV GLNTKGFKMP YELSGGEQQR VDIARAMLNS PKLILADEPT GNLDPETSDG
IMQLLFRISR EEGAAVVMAT HDYILLQKFP SRVLRTENGK VTDHASVTFV