Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6512 |
Symbol | |
ID | 8362696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 8173926 |
End bp | 8174729 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644968640 |
Product | peptidase M48 Ste24p |
Protein accession | YP_003126117 |
Protein GI | 256425464 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00139826 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.073163 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAAGA AACTTCTTCT TCTCGGTACG GGCCTGGCGC TGATCACAGC ATGCGCCAAA GTACCTATTA CTGGCCGCAG CCAGTTAAAC CTGATCCCTG AAAGCACCAT GCAATCTATG GCCCTCCAGG AATATCAGAG TTTTCTTTCT CAGAATAAAA CTGTCGCAGC AACCACCAGT AAGGATGCTG AAATGGTAAA AAGAGTAGGA CAGCGTATCG CGAATGCCGT TACCAAGTAC ATGAACGATC ATGGTGCCGG TTCTCAGATT GCCAACTACA AATGGGAATT CAACCTGGTA GATAGTAAGG AAGTGAACGC CTGGTGTATG CCGGGTGGTA AAGTAGTGGT GTATACAGGT CTGCTGCCTG TTACACAGAA TGAAACGGCG CTTGCCTGCG TAATGGGACA TGAAATTGCG CACGCTATCG CACGTCATGG TAACGAGCGT ATGAGCCAGC AGGTAGTGGC ACAGGGAATC CAGGTAGCTG GTTCCGTAGC CCTGAACCGT AACCCTGCTG CACAGAATAT CTTCCTGCAG TCTTTTGGTG TAGGCGGTAA CCTGGGTATG CTCGCATATT CCCGTAAAAA TGAGCTGGAA GCTGACCACC TGGGTGTGAT CTTCATGGCA ATGGCGGGTT ATAATCCACA GGAATCAATT CCTTTCTGGC AACGTATGGC TTCTCAGAGC GGCGGTAACA AACCACCCGA AATTACCAGC ACGCACCCGA GCGATGAACG TCGTGTAGCT GAATTACAGC GCCTTATGCC TGAAGCAATG AAGTATTATA CACCGATCAA GTAA
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Protein sequence | MQKKLLLLGT GLALITACAK VPITGRSQLN LIPESTMQSM ALQEYQSFLS QNKTVAATTS KDAEMVKRVG QRIANAVTKY MNDHGAGSQI ANYKWEFNLV DSKEVNAWCM PGGKVVVYTG LLPVTQNETA LACVMGHEIA HAIARHGNER MSQQVVAQGI QVAGSVALNR NPAAQNIFLQ SFGVGGNLGM LAYSRKNELE ADHLGVIFMA MAGYNPQESI PFWQRMASQS GGNKPPEITS THPSDERRVA ELQRLMPEAM KYYTPIK
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