Gene Cpin_6507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6507 
Symbol 
ID8362691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8169664 
End bp8170455 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content46% 
IMG OID644968635 
ProductO-methyltransferase-like protein 
Protein accessionYP_003126112 
Protein GI256425459 
COG category[R] General function prediction only 
COG ID[COG4122] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00174248 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.189138 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGCCTCC AGTGGGAATT AGCTAAAAAG TACCTGCATT ATTACTTTAC CGCAGGCAAC 
CGTCATGATG TACATTCTCC ATTTGTATTT GACCTGGTAG AAAAGGTGTT ACGCGACAGG
AAGAAACCGC CTGTGTTCCG CGAAATAGAG CAAATGAGAA AATCCCTGCT GGCCAGTACG
GAAACATTAC AGGTAACCGA CCTCGGAGCC GGTTCTCTTA CCAATGCAGG CCGTGAGCGT
AAAGTAAGCG ATATTACCCG CCATGCCGCC AAACCGGCTA AATTTGGTCA GCTGTTCTAT
CGCCTGATAC AGTACTTCCA GCCGGAATAC CTGCTTGAAT TAGGTACTTC TATGGGGATG
TCTACTTCCT ATATGGCCAA GGCAGCACCT GGCGCAACCG TACATACGAT TGAAGGTTGT
CCGAATATCG CCGCCCGTGC AGCTAAAAAC TTTGCCTCCT TACAGCTCAG TAATATTAAA
CAGCATACGG GTAATTTTGA TACCGTATTG CCTGCATTGT TGAAAGAAAT GCCCAGACTA
GACTATGTCT ATATTGATGG TAACCATCGT TCCGCACCAA CCCTGGCATA CTTCGAACAA
TGCCTGGAGA AAGTACACGA TGATTCTCTG TTTATCTTTG ATGATATTCA CTGGACGCCG
GATATGGAAA GTGCATGGCA TACCATTCAG CAGCATCCGA GAGTGACCTT TACCATCGAT
CTGTTCTTTA TCGGACTGGT GTTTTTCAAA CCGGAAATGA AGATCAAACA GCACTTTGTA
TTGAAGTATT AA
 
Protein sequence
MGLQWELAKK YLHYYFTAGN RHDVHSPFVF DLVEKVLRDR KKPPVFREIE QMRKSLLAST 
ETLQVTDLGA GSLTNAGRER KVSDITRHAA KPAKFGQLFY RLIQYFQPEY LLELGTSMGM
STSYMAKAAP GATVHTIEGC PNIAARAAKN FASLQLSNIK QHTGNFDTVL PALLKEMPRL
DYVYIDGNHR SAPTLAYFEQ CLEKVHDDSL FIFDDIHWTP DMESAWHTIQ QHPRVTFTID
LFFIGLVFFK PEMKIKQHFV LKY