Gene Cpin_6506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6506 
Symbol 
ID8362690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8168645 
End bp8169439 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content48% 
IMG OID644968634 
Productphospholipase/Carboxylesterase 
Protein accessionYP_003126111 
Protein GI256425458 
COG category[R] General function prediction only 
COG ID[COG4099] Predicted peptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0298565 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.36318 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAT TCCGTGCCCT AGCGCTCTTA TTGTTCACCT ATCTCTCTTC TATGGCTCAG 
ACTACCCCCG ACTACAGTGC ATTCAGTTAT GAAACTTTTG TACACAACGG GGATACCCTG
CGCTACCGGA TGCTGAAACC ATTGAATTAT GAATCACAGA AAGCTTATCC GCTTGTGATG
TTTCTGCATG GTTCCGGAGA AAGAGGGACT GATAATGCCG CACAGCTCCT GCATGGTGGC
AGTCTTTTCC TGAAAGATTC GCTGCGTCAG CAGTTCCCGA CTTTTGTGAT CTTCCCGCAA
TGTCCGCCGG ATTCCATGTG GGCAAGTATG AAGGTAAAAC GTGATGCAAG CGGTAAAGCA
ATTGAACGGT CCTTTTCCGA CGGAACAGAT CCGGAGGCAA CACCAGGACT GCTGGTGAAA
TTACTGACGG ATAGTCTGGT AAAAGCCGGA AAGGTAGACA GCCGGAGATT GTACCTGGGT
GGATTATCAC TTGGGGGAAT AGGAACATAT GATATACTGG CACGCTATCC TGGTATGTGG
GCGGCTGCAT TCCCGATCTG TGGTATCGGT AATGTGGATA ACGCGGTTAA ATTCAGAAAA
GTACCGATGT GGATCTTCCA TGGGGCGGAG GACAATGTCG TACCTACTTT CGGATCAAAG
AATTATTATG AGGCCCTGAA GAAACTGAAA GCGGATGTGA AGTATACGGA GTATCCGGGT
GTTGGGCACA ACAGCTGGGA CAATGCGTTT GCAGAACCGA ATCTGCTGCC CTGGATATTC
TCCCATAAGA AATAA
 
Protein sequence
MKTFRALALL LFTYLSSMAQ TTPDYSAFSY ETFVHNGDTL RYRMLKPLNY ESQKAYPLVM 
FLHGSGERGT DNAAQLLHGG SLFLKDSLRQ QFPTFVIFPQ CPPDSMWASM KVKRDASGKA
IERSFSDGTD PEATPGLLVK LLTDSLVKAG KVDSRRLYLG GLSLGGIGTY DILARYPGMW
AAAFPICGIG NVDNAVKFRK VPMWIFHGAE DNVVPTFGSK NYYEALKKLK ADVKYTEYPG
VGHNSWDNAF AEPNLLPWIF SHKK