| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6503 |
|---|
| Symbol | |
|---|
| ID | 8362687 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 8165342 |
|---|
| End bp | 8166253 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644968631 |
|---|
| Product | coproporphyrinogen III oxidase |
|---|
| Protein accession | YP_003126108 |
|---|
| Protein GI | 256425455 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0408] Coproporphyrinogen III oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.602583 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACATTA AAGACAACTT TATTTCCCTT ATTCACCGCC TGCAGGACGA GATCTGCACA
GCGCTGGAAA ATATAGATGG TAAAGCCAGT TTTCGTGAAG ACCGTTGGGA ACGTCCTGGT
GGCGGTGGTG GTAAATCACG CGTGATTGCA GATGGCAACG TATTCGAAAA AGGCGGTGTC
AATACCTCTG TTGTACATGG AGAATTGCCC GAACTGATGG CTAAACAGTT TGGTGTAGGC
CAGGCTCAGT TCATGGCCTG TGGTATTTCC CTGGTTATTC ACCCGGTGAA TCCTTTTGTA
CCGACTGTAC ACGCCAATTT CCGCTATTTT GAACTGTATG ACGATAACGG TACACTGAAA
GATTCCTGGT TTGGCGGCGG GGCTGATCTG ACGCCTTACT ACCTGGATGA ACAGGATGGT
ATACATTTTC ACCAGACATT CAAAAATGCC TGTGATCCTT TTGGTACGGA GCTGTATCCG
CTGTTTAAAA AGCATTGTGA CGAGTACTTT ATCAACAAAC ACCGTAATAA TGAAGCCCGC
GGTATCGGCG GTATCTTCTA CGACTATCAG CGTCCCGGTG AAAAGATGAA TGCAGAACAG
CTGTTCAACT TTGCCAAAGC CAATGGCGAA GCGTTTATAC AGGCTTATCT GCCCATCGTG
GAAAAGACGA AAGACATACC ATATACAGAT GCACAGAAAG ACTGGCAGGA ATACAGGCGT
GGACGCTATG TAGAGTTCAA CCTGATTCAT GACAGAGGTA CTTTGTTTGG TCTGAAAACC
AACGGCCGTA CGGAATCCAT ACTTATGAGT CTTCCGCCAA GAGCACGCTG GGAATACGAT
TACCACCCTG CTGAAGGTAG TCCGGAAGCA CAACTGGTGG AATTCCTGAA ACCCAGAGAG
TGGGCCGTTT AA
|
|---|
| Protein sequence | MNIKDNFISL IHRLQDEICT ALENIDGKAS FREDRWERPG GGGGKSRVIA DGNVFEKGGV
NTSVVHGELP ELMAKQFGVG QAQFMACGIS LVIHPVNPFV PTVHANFRYF ELYDDNGTLK
DSWFGGGADL TPYYLDEQDG IHFHQTFKNA CDPFGTELYP LFKKHCDEYF INKHRNNEAR
GIGGIFYDYQ RPGEKMNAEQ LFNFAKANGE AFIQAYLPIV EKTKDIPYTD AQKDWQEYRR
GRYVEFNLIH DRGTLFGLKT NGRTESILMS LPPRARWEYD YHPAEGSPEA QLVEFLKPRE
WAV
|
|---|
| |