| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6497 |
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| Symbol | |
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| ID | 8362681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8158758 |
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| End bp | 8160086 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644968625 |
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| Product | protoporphyrinogen oxidase |
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| Protein accession | YP_003126102 |
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| Protein GI | 256425449 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1232] Protoporphyrinogen oxidase |
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| TIGRFAM ID | [TIGR00562] protoporphyrinogen oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.56742 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACAC AACCCGTTAT CATTGCCGGC GCCGGTATTG CCGGACTAAG TATTGCCTAC
GAATTACAGC AGAAGGGCAT TCCCTATGAA ATTATGGAAG CCTCTTCCTA TGCGGGAGGT
GTTGTAAAAT CATTACATAT AGACGGTTAC GAACTGGATG CAGGCCCGAA TTCTCTGGCC
GCTTCTCCCG AGTTCATGGC CTATATCGAT CAACTGGGTT TGCAGGAGGA GGTGCTGGAA
GCAGCTGCTG CCAGTAAAAA CCGCTTCCTG GTCAGAAATA ATAAATTACA TGCCGTATCT
CCACATCCGT TTAAGATACT GCAATCGGAC TATATCAGTG GCGGCGCTAA ATGGCGGTTG
TTCACAGAAA GATTTCGCAA AGCGGCTGCC CCGGAAGGAG AAGAAACAGT CTCCTCCTTT
GTGACCCGCC GCTTTGGAAA GGAAATAAAT GAATACCTGT TTGAGCCCGT ACTTTCCGGC
ATTTATGCAG GTAATCCTGA TCTGATGTCA GTAGGGGAGG TCCTCCCGAT GCTGCCACAG
TGGGAAAAGA AATACGGTAG TGTTACGCAG GGACTGATGA AGAATAAAGG CGCTATGGGC
GGCCGTAAGA TCATTGCCTT TAAAGGAGGT AATGCCACAC TGACCAACAG ATTACAATCC
CTGCTTACCA GTAAAATAAG ATTCAATTGT GCTATAACAG GCGTTACCCG TGGGGCAGAC
GACTATATTT TACAATATAC AGAGAGCGGT AATACCGCCA TGTTGAACGC ATCCCGTGTG
ATTTTCACGA CACCTGCATA TAGTACGGCT GTTGCAATAC AGGGGCTGGA TTCTTCTCTC
GCCGCACATC TCAGCGAGGT GCCTTATCCC CGTATGGGCG TACTGCACCT TGGATTCGGA
CAGGAAGCCC AGCAGAAAGC ACCGGCGGGT TTTGGATTCC TGGTGCCACA TGCTGCAGGA
AAACATTTCC TGGGCGCTAT CTGTAACAGT GCTATATTCC CTTCCCGCGT GCCAACAGGC
AAAGTATTGT TTACGGTGTT TGTAGGTGGC GCAAGACAGG AACAGCTGTT TGACCAACTG
GGACCTGAAA AGCTGCAACA AACCGTAGTA AATGAACTGA TGGAACTGCT GGGACTGACG
ACGCCTCCTG AAATGCAACG TTTCAGTGAA TGGAACAGGG CGATCCCACA GTTAAATGTA
GGTTATGCAC AGACCAGACA ACAGATCCGC TTCTTTGAAC AGCGTTATCC TGGCATCAGA
CTGGGAGGTA ACTATGTGAC AGGTGTGGCG GTGCCCGCTA TTATACAGGC GGCGAAAGGA
TACTGTTGA
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| Protein sequence | MQTQPVIIAG AGIAGLSIAY ELQQKGIPYE IMEASSYAGG VVKSLHIDGY ELDAGPNSLA
ASPEFMAYID QLGLQEEVLE AAAASKNRFL VRNNKLHAVS PHPFKILQSD YISGGAKWRL
FTERFRKAAA PEGEETVSSF VTRRFGKEIN EYLFEPVLSG IYAGNPDLMS VGEVLPMLPQ
WEKKYGSVTQ GLMKNKGAMG GRKIIAFKGG NATLTNRLQS LLTSKIRFNC AITGVTRGAD
DYILQYTESG NTAMLNASRV IFTTPAYSTA VAIQGLDSSL AAHLSEVPYP RMGVLHLGFG
QEAQQKAPAG FGFLVPHAAG KHFLGAICNS AIFPSRVPTG KVLFTVFVGG ARQEQLFDQL
GPEKLQQTVV NELMELLGLT TPPEMQRFSE WNRAIPQLNV GYAQTRQQIR FFEQRYPGIR
LGGNYVTGVA VPAIIQAAKG YC
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