Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6496 |
Symbol | |
ID | 8362680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 8157978 |
End bp | 8158718 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644968624 |
Product | protein of unknown function DUF72 |
Protein accession | YP_003126101 |
Protein GI | 256425448 |
COG category | [S] Function unknown |
COG ID | [COG1801] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.986106 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAACAG GTAAAATACA TATCGGAACC TCCGGATGGA GTTACAAACA CTGGCGGGAG ATCTTCTACC CGCCAGACCT CAAACCGACA GATTACCTCT CTTTTTATGC CGGTCATTTC CACACGGCAG AGATCAATAC CAGTTTCTAT CATCTTCCTA AGCCTGCTAC TGTTGAAAAA TGGACCGCTA CGGTGAACAG CAGATTCCGT TTCTGCCCTA AGATCAGCCG TTACATTACC CATATTAAAA AGCTAAATGA TCCTGAAGAT ACATTGCCCA GGTTCTTCGA TGTTTTTGAT CCCGTGCAAA AGCACCTGGG ACCAGTGCTG ATTCAGCTGC CGGCCACACT GGGATTTCAT GAGGATAAAG TGAGCCACTT CTTTGAAGTG CTCAAGCAAT ACAAAGGTTA CACTTTCGCT ATTGAACCCA GACATGACAG CTGGCTGAAA GATAATGCTA TCGCCTTACT TGAAAAGTAT AAAGTCACTT TTGTGATAGC TGAATCTGGT AAGCGTTGGC CATATGGAGA GTTTGTCACC GCCCGGCATA TCTATGTGCG TTTTCATGGT CCGGATGGCT CTTATGCAAC ATCCTACAGC CATAGAACCC TGGAAAAGTA TGCGCAAAAA GTACTTGACT GGCAGCAAGA AGGGCATATT GTTTGGGTGT TTTTCAATAA TGACGTTCAT GGATACGCCA TCGAAAATGC AAAGACATTG ATTGATATGA CTAAAGTATG A
|
Protein sequence | MATGKIHIGT SGWSYKHWRE IFYPPDLKPT DYLSFYAGHF HTAEINTSFY HLPKPATVEK WTATVNSRFR FCPKISRYIT HIKKLNDPED TLPRFFDVFD PVQKHLGPVL IQLPATLGFH EDKVSHFFEV LKQYKGYTFA IEPRHDSWLK DNAIALLEKY KVTFVIAESG KRWPYGEFVT ARHIYVRFHG PDGSYATSYS HRTLEKYAQK VLDWQQEGHI VWVFFNNDVH GYAIENAKTL IDMTKV
|
| |