Gene Cpin_6496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6496 
Symbol 
ID8362680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8157978 
End bp8158718 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content44% 
IMG OID644968624 
Productprotein of unknown function DUF72 
Protein accessionYP_003126101 
Protein GI256425448 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.986106 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACAG GTAAAATACA TATCGGAACC TCCGGATGGA GTTACAAACA CTGGCGGGAG 
ATCTTCTACC CGCCAGACCT CAAACCGACA GATTACCTCT CTTTTTATGC CGGTCATTTC
CACACGGCAG AGATCAATAC CAGTTTCTAT CATCTTCCTA AGCCTGCTAC TGTTGAAAAA
TGGACCGCTA CGGTGAACAG CAGATTCCGT TTCTGCCCTA AGATCAGCCG TTACATTACC
CATATTAAAA AGCTAAATGA TCCTGAAGAT ACATTGCCCA GGTTCTTCGA TGTTTTTGAT
CCCGTGCAAA AGCACCTGGG ACCAGTGCTG ATTCAGCTGC CGGCCACACT GGGATTTCAT
GAGGATAAAG TGAGCCACTT CTTTGAAGTG CTCAAGCAAT ACAAAGGTTA CACTTTCGCT
ATTGAACCCA GACATGACAG CTGGCTGAAA GATAATGCTA TCGCCTTACT TGAAAAGTAT
AAAGTCACTT TTGTGATAGC TGAATCTGGT AAGCGTTGGC CATATGGAGA GTTTGTCACC
GCCCGGCATA TCTATGTGCG TTTTCATGGT CCGGATGGCT CTTATGCAAC ATCCTACAGC
CATAGAACCC TGGAAAAGTA TGCGCAAAAA GTACTTGACT GGCAGCAAGA AGGGCATATT
GTTTGGGTGT TTTTCAATAA TGACGTTCAT GGATACGCCA TCGAAAATGC AAAGACATTG
ATTGATATGA CTAAAGTATG A
 
Protein sequence
MATGKIHIGT SGWSYKHWRE IFYPPDLKPT DYLSFYAGHF HTAEINTSFY HLPKPATVEK 
WTATVNSRFR FCPKISRYIT HIKKLNDPED TLPRFFDVFD PVQKHLGPVL IQLPATLGFH
EDKVSHFFEV LKQYKGYTFA IEPRHDSWLK DNAIALLEKY KVTFVIAESG KRWPYGEFVT
ARHIYVRFHG PDGSYATSYS HRTLEKYAQK VLDWQQEGHI VWVFFNNDVH GYAIENAKTL
IDMTKV