Gene Cpin_6489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6489 
Symbol 
ID8362673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8150593 
End bp8151987 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content49% 
IMG OID644968617 
ProductNAD(P)(+) transhydrogenase (AB-specific) 
Protein accessionYP_003126094 
Protein GI256425441 
COG category[C] Energy production and conversion 
COG ID[COG1282] NAD/NADP transhydrogenase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATCGT TGATCTATCT GATAGGCTCT GTCACATTTA TCGTCGGATT AAAGATGCTG 
AGTAATCCCG CTACCGCCAG GAAAGGCAAT GCCATTGCTG CGGGAGGAAT GGCGCTGGCC
ATACTCGGAA CAATTTTCCT TTACAGACAT AACGGACACG GATTACACAA TTACGGCTGG
ATTATTACAG GTCTGGTAGT AGGCGGCGTG ATAGGTCTTA TTTCTGCCAG AAGAGTGAAA
ATGACCGCTA TGCCTGAAAT GGTTAGTCTG TTTAATGGCA TGGGAGGTGC CTGTGCGGCA
CTGATCTCTG TCGTGGAATT TGAATATATG GCGGGTACGC TGGCTGATAT ACCAAATGTG
CACGGGCAAC TGGGGATTAT ATTCGCAGGA ATGATCATCG GTGCTGTGTC ATTTGCGGGA
TCCGTGATTG CATGGGGAAA GCTGAACGGA CGTATCAGAG ATATTTCGTT CCAGGGACAG
CATATCGTTA ATCTGTCAGT ATTGGCAGTC ATCATGCTGC TGACCCTATT CGTGACCGTT
ACATTACCCT CCGCCACAGT GGCCTTATTT GCCACAGTAC TTGTGCTGTC ACTGGTCTAC
GGTATATTTT TCGTGCTGCC TATCGGCGGA GCAGATATGC CGGTGGTGAT TTCCCTGTTG
AATTCATTTA CTGGTGTCGC AGCTGCCTGT GGCGGTTTCC TGTATAATAA TCCGGTGATG
CTGACAGGAG GGATCCTGGT AGGTTCTGCA GGAACTATCC TGACGATCCT GATGTGTAAA
GCAATGAACC GCTCCCTGAA GAATGTGTTG ATCGGCGCAT TTGGTGGTGC GAAAGCAGGC
GGCGTTACCC GGGAACAGGG CGCTTATAAA GAGATTGGCT TGTCAGATAC AGCGGTCGTA
ATGGCCTATG CACATAAAGT GATGATCGTA CCGGGCTATG GATTGGCTGT TGCACAGGCG
CAACATGCCT GTCATGAACT GGAAACACTC CTGGAGGCAA GAGGTGTGGA AGTTAGGTAT
GCTATCCATC CTGTGGCCGG CCGTATGCCG GGGCATATGA ACGTATTGCT GGCTGAAGCA
GACGTGCCGT ATGACAAACT GCTGGAGATG GAACAGGCTA ACGGACAGTT TAATACGACG
GATGTGGTAC TGATATTAGG CGCAAATGAC GTGGTAAACC CGGCTGCAAA AAGCGACCCT
TCCAGCCCGA TCTATGGTAT GCCGATACTG GAAGTAGAAA ATGCCAGAAG CGTGATTGTC
AATAAACGCA GCATGAAACC GGGGTATGCC GGTATTGAAA ATGACCTCTT TTTCCAACCT
AAAACATCCA TGCTGTTTGG CGATGCTAAA CAGGTACTGC AACAGCTGGT GGCAGAGATT
GTGAACAGCC TATAA
 
Protein sequence
MLSLIYLIGS VTFIVGLKML SNPATARKGN AIAAGGMALA ILGTIFLYRH NGHGLHNYGW 
IITGLVVGGV IGLISARRVK MTAMPEMVSL FNGMGGACAA LISVVEFEYM AGTLADIPNV
HGQLGIIFAG MIIGAVSFAG SVIAWGKLNG RIRDISFQGQ HIVNLSVLAV IMLLTLFVTV
TLPSATVALF ATVLVLSLVY GIFFVLPIGG ADMPVVISLL NSFTGVAAAC GGFLYNNPVM
LTGGILVGSA GTILTILMCK AMNRSLKNVL IGAFGGAKAG GVTREQGAYK EIGLSDTAVV
MAYAHKVMIV PGYGLAVAQA QHACHELETL LEARGVEVRY AIHPVAGRMP GHMNVLLAEA
DVPYDKLLEM EQANGQFNTT DVVLILGAND VVNPAAKSDP SSPIYGMPIL EVENARSVIV
NKRSMKPGYA GIENDLFFQP KTSMLFGDAK QVLQQLVAEI VNSL