Gene Cpin_6484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6484 
Symbol 
ID8362668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8144721 
End bp8145149 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content45% 
IMG OID644968612 
Productpeptidylprolyl isomerase FKBP-type 
Protein accessionYP_003126089 
Protein GI256425436 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.467746 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCAG TTAAAAACGG AGATACGGTG CGTGTGCATT ATCATGGCCG CCTGACCAAC 
GGAACAACTT TTGATTCGTC CGAAGGCAGA GACCCGCTGG AATTTAAGGT TGGCGCCGGT
ATGGTTATTA AAGGCTTCGA CAATGGTGTT GTTGACATGA CTATTGGTGA AAAAAGAACC
TTGAATATCC CAGTTGAAGA AGCATATGGT CCTAAAAATG ATGAGTTGAT CATGGAATTT
CCAAAGGAAA ACATTCCATC TGATCTGAAC CCACAGGTAG GTATGGATCT GCAGATGAGT
AACCCACAGG GTCAGGTATT CCCTGTTAAG GTTGCTGCTA TCGGCGATAC TTCTATTACA
CTGGATGCTA ACCATCCCCT GGCTGGTGAA GCCCTGATCT TCGATATCGA ACTGGTTGAG
ATCAAGTAG
 
Protein sequence
MQAVKNGDTV RVHYHGRLTN GTTFDSSEGR DPLEFKVGAG MVIKGFDNGV VDMTIGEKRT 
LNIPVEEAYG PKNDELIMEF PKENIPSDLN PQVGMDLQMS NPQGQVFPVK VAAIGDTSIT
LDANHPLAGE ALIFDIELVE IK