| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6481 |
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| Symbol | |
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| ID | 8362665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8141511 |
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| End bp | 8143820 |
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| Gene Length | 2310 bp |
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| Protein Length | 769 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644968609 |
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| Product | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase |
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| Protein accession | YP_003126086 |
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| Protein GI | 256425433 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
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| TIGRFAM ID | [TIGR01371] 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.668969 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACCA ACATTCTTGG CTATCCGCGT ATTGGTAGCA ACCGGGAATT GAAGAAGGCC
AATGAAGCCT ATTGGACCGG AAAGATCTCC CTTGAAAAAT TACAGCTTAC CGCCAGACAG
TTACGCCGAC AGAACTGGGA GACATTACAT CAGGCAGGAA TTGACCTGAT TCCTTCAAAT
GATTTCTCTT ATTACGATCA GATACTTGAT ATGTGTATCA TGACCGGCGC TATACCTGCC
CGTTTCCAGG CATTAAAGGA AAGTCTTGTT ACACCGAGCA GTCCGGAGCT GTATTTCGCG
ATGGCACGTG GCTATCAGAA AAACGGATTT GATGCAACGG CCATGGAAAT GACTAAATGG
TTTGATACCA ACTATCATTA CCTGGTACCT GAATTTGATG CTTCACAGGA ATTCAGTCTG
CTGTACAATA AATGCCTGGA AGAATTCAAA GAAGCACAGG CGATCGGCAT CCATACCAAA
CCTGTATTGG TAGGTCCTGT CAGCTTCCTG CTCCTGGGAA AAATAAAAGA GGAATCCTTA
CAGCTGCCAG CCTTGCTGGA TAAACTATTA CCGGTATACA TCCAAGTATT ACAATCACTT
TACCAGGCAG GCGCTACCTG GATACAGATA GATGAACCTA CCCTTGTACT GGACCTGACA
CCGGCACAAC AGGACCTCTT CCTGCAGGCA TATGCGAAGA TCAGAAAAGC AGTTCCTGCA
CTGAAACTTC TGCTGACTAC CTACTTTGGC GGATTACAGG ATAATACAGC CCTGACCACA
CAGTTGCCGG TAGATGCTTT ACATATAGAC CTGGTCAGAG CGCCGGAACA ACTGGATACT
TTACTGGCGG CTTTACCTGC CGGTTTACAA CTTTCTGTAG GTGTTGTGAA TGGTCGTAAC
ATATGGAAAA ACAACTACGA TACGTCCCTC CTGCTGATTA ATAAGGCGAT TGCAGCCCTT
GGAAGAGAAC GAGTACTCAT AGCGACTTCC TGTTCACTGC TGCATACACC TTATGATCTT
GAACTGGAAA CAGACGAATC CGTACTTACA CCACAGATCA AAAACTGGAT GGCTTTTGCA
AAACAGAAAG TGTATGAAGT GATCGCGTTG AAAGATATTC TGAATGGTCA TGATGAATTG
CTGCTGCAAA CAAACCAGCA CACCATGCAG GAAAGAGCAA CAGCTGCTAT TATTCATAAA
CCAGCTGTTA AAGCGCGCCT GGCAGCCCTG ACGCCTGCAG ATGCAGCACG TAAAAGCATA
TTCACTGCCC GTCAGAAAGC ACAGGAAGAA GTATTGCAAT TGCCGCTGTT TCCTACAACG
ACAATCGGCT CTTTTCCGCA AACAGAAGAT ATCAGAAAGC TACGCGCCGA TCTGAAAAAA
GGAGATATTA CAAAAGAAGG ATACGATACA GCTATTCGTA AAGCCATACA GGATTCTGTA
CAGTTACAGG AAAGCCTGCG CATAGACGTA CTGGTACATG GAGAGTTTGA GCGTAATGAC
ATGGTGGAAT ACTTTGGTGA GCAACTGGAA GGATTTGTAT TCACAAAAAA CGGCTGGGTA
CAGAGCTATG GTTCCCGATG CGTAAAACCA CCGGTGATAT ATGGCGATGT GCAACGTAGT
ACACCGATGA CAGTTGAATG GAGCAGTTAT GCACAATCGC TGACAAACAA ACCGATGAAA
GGAATGCTGA CAGGCCCTGT TACCATTCTT CAATGGTCTT TTGTAAGAGA TGATCAGCCA
CGTGCTGAAA CCACATTACA GATAGCATTG GCTATCCGGG ATGAAGTGGT GGATCTTGAA
CAGGCAGGCA TCCGGGTAAT ACAGGTGGAC GAACCTGCTA TCAGAGAAGG GCTTCCATTA
CGTCAGGCGG ACTGGCAATC TTACCTGGAC TGGGCTGTAA AAGCCTTCCG TGTATCAGTT
TCCGGCGTGG AAGATGCCAC ACAGATACAT ACGCACATGT GTTATTCAGA ATTCAATGAT
ATTATCAGCA ATATTGCTGC AATGGACGCA GATGTGATCA CCATAGAAAC ATCGCGTTCA
CAGATGGAAT TGCTGGAAGT ATTCTCCACT TTCCATTATC CGTATGAGAT CGGACCAGGC
GTATATGATA TTCACTCACC ACGCGTGCCT ACCGTAGCTG AAATGACAGA ACTGCTGGAA
AAGGCTATAC AGTTGTTGCC GGCACGGAAT ATATGGGTGA ATCCGGACTG CGGACTTAAA
ACCCGTAAAT GGCCGGAAAC AGAGCAGGCA TTACGCAACA TGGTAGCTGC CGCCCGCAAC
ATGCGTGTAG CGGTTCAGAC AATGGTATAA
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| Protein sequence | MQTNILGYPR IGSNRELKKA NEAYWTGKIS LEKLQLTARQ LRRQNWETLH QAGIDLIPSN
DFSYYDQILD MCIMTGAIPA RFQALKESLV TPSSPELYFA MARGYQKNGF DATAMEMTKW
FDTNYHYLVP EFDASQEFSL LYNKCLEEFK EAQAIGIHTK PVLVGPVSFL LLGKIKEESL
QLPALLDKLL PVYIQVLQSL YQAGATWIQI DEPTLVLDLT PAQQDLFLQA YAKIRKAVPA
LKLLLTTYFG GLQDNTALTT QLPVDALHID LVRAPEQLDT LLAALPAGLQ LSVGVVNGRN
IWKNNYDTSL LLINKAIAAL GRERVLIATS CSLLHTPYDL ELETDESVLT PQIKNWMAFA
KQKVYEVIAL KDILNGHDEL LLQTNQHTMQ ERATAAIIHK PAVKARLAAL TPADAARKSI
FTARQKAQEE VLQLPLFPTT TIGSFPQTED IRKLRADLKK GDITKEGYDT AIRKAIQDSV
QLQESLRIDV LVHGEFERND MVEYFGEQLE GFVFTKNGWV QSYGSRCVKP PVIYGDVQRS
TPMTVEWSSY AQSLTNKPMK GMLTGPVTIL QWSFVRDDQP RAETTLQIAL AIRDEVVDLE
QAGIRVIQVD EPAIREGLPL RQADWQSYLD WAVKAFRVSV SGVEDATQIH THMCYSEFND
IISNIAAMDA DVITIETSRS QMELLEVFST FHYPYEIGPG VYDIHSPRVP TVAEMTELLE
KAIQLLPARN IWVNPDCGLK TRKWPETEQA LRNMVAAARN MRVAVQTMV
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