Gene Cpin_6475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6475 
Symbol 
ID8362659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8134813 
End bp8135670 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content44% 
IMG OID644968603 
ProductOmpA/MotB domain protein 
Protein accessionYP_003126080 
Protein GI256425427 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.38145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTA GATTCATAGC ACTATCATTA TCCCTTCCAA TTTTCTTATT CTCCTGCGTG 
AGCACAAAGA AGTTTAAAGC TTCTGAGGCG AAGTACGCGG AACTGTCATC GCAGTATGCA
AGCTTACAGG GTAAGCTGGA AGATTGCCAG CGCAGCCTGC GTGATACCGC ATCAGCTTTT
GAACGCAGCA GAAACGTAAG TGAAGAAAGA GTGGAAGGGC TCAAACAAAA TAACAGCACC
TTACTTAACC AGTTGAAAGA TCTCTCTGTG ATCAGTAATT CACAGGCGGA AAGCATTAAG
AAATCACTGG ATAACATCGG CGCTAAAGAC GCTTACATAC AGGACCTGCA GTCTGCGATT
GCACGTAAAG ACTCCCTGAA CATGGCACTG GTGATGAACC TGAAAGGTGC TATCGGTAAC
CTGGATGATA AGGATATTAA CATCAAAGTG GAAAAAGGTG TAGTGTATAT CGATATCTCT
GATAAGATGT TGTTTGAAAG CGGTAGTTAC GATGTTACAC CAAAAGCGAA GGAAGTACTT
GGTAAAGTGG CTAAAGTGCT GTTAAATCAG CCTGATATCG AATTCATGGT AGAAGGTCAT
ACCGACAGCA ACCCTTATAA GAAAGGTGTA TTACTGGACA ACTGGGATCT GAGTGTGAAA
AGAGCTACTG CTGTAACAAG GGTATTGCAG AATGATTACA ATATTCCGCC AGCTCATATC
ACTGCGGCAG GTAGAAGTGA ATATCTGCCA ATCGCCAGCA ATGATACGCC AGAAGGACGC
GCTACCAACC GTCGTACACG TATCGTGATT CTGCCTCAGC TGGATCAGTT CTTCAAACTG
CTGGAGAAAA AACAATAA
 
Protein sequence
MKLRFIALSL SLPIFLFSCV STKKFKASEA KYAELSSQYA SLQGKLEDCQ RSLRDTASAF 
ERSRNVSEER VEGLKQNNST LLNQLKDLSV ISNSQAESIK KSLDNIGAKD AYIQDLQSAI
ARKDSLNMAL VMNLKGAIGN LDDKDINIKV EKGVVYIDIS DKMLFESGSY DVTPKAKEVL
GKVAKVLLNQ PDIEFMVEGH TDSNPYKKGV LLDNWDLSVK RATAVTRVLQ NDYNIPPAHI
TAAGRSEYLP IASNDTPEGR ATNRRTRIVI LPQLDQFFKL LEKKQ