Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6469 |
Symbol | |
ID | 8362653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 8128914 |
End bp | 8129990 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644968597 |
Product | hypothetical protein |
Protein accession | YP_003126074 |
Protein GI | 256425421 |
COG category | [S] Function unknown |
COG ID | [COG4299] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00127686 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAAA GGCTCCTTTC GCTCGACTTC TTCCGCGGAT TAACTGTCGC TGCCATGATA TTGGTGAATA ATCCGGGAAG CTGGTCGTAT GTCTATCCGC CACTGGAACA TTCAAAATGG AATGGCTGTA CACCAACAGA CCTGGTTTTT CCTTTCTTCC TCTTTATGGT CGGTGTATCG GTTACTTTTG CGCTGAGCAG CAGGAAGGCT GATGTCAGCG GACATACCTC ACTGATCATT CATATCATCC GCCGTGCGGC GATACTTTTT GCTATCGGAC TGGCTTTTCG TCTGATCCCT TCTTTTGATT TCCATAATCT GAGGATTTTA GGCGTATTAC AGCGCATTTC TATCGTTTTC CTTGTTATTT CCTTACTATA CTTAAAAACG GGCACTAAGC CCCGTATATG GCTCTGCATT TCGTTCCTGG TGATCTACTG GCTGCTGATG ACAGTGGTCC CGGTACCCGG GTATGGTCCG GCCAACCTGG AAGCGGAAAC CAATCTGGCT GCCTGGATAG ACAGAACAGT ACTGGGAGAG CAGCATCTCT GGAAACAGGC CCGCACCTGG GACCCTGAAG GATTGCTTAG TACACTGCCT GCGATATCCA CAGGATTGCT GGGTATTATG ACCGGCGACT GGTTACGCAG AAAAGATGTG GCGGATGCGG ATAAGGTGTC CTGGTTGTTT GCAGCAGGTT TTCTGTCTGT TATCGCAGGG CTGATATGGG ATGGCTTTTT CCCGATCAAT AAATCATTAT GGACAAGTTC CTTTGTTTTG TATACAGGCG GACTGGCAGC TATGGGCCTT GCACTTTCTT ACTGGCTCAT CGATGTGCAA CAGTATAAAA GTATCACGCC TCCTTTCGTA GCATTCGGCC GTAATGCGAT CACCGCCTAT GTTTTATCCG GCGCCATTCC TATGATATTT AAAGGTATGT CCGGCGGTAT GTTCCGCGCA TATGGCGCTT TCTTATCTCC GTTCAATGCA TCCCTTGCAG CGGCGATCAC CCTGGTCATC CTGATGTTCA TACCAGTATG GATCATGTAT AAAAGAAATA TAATCGTAAA AATCTGA
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Protein sequence | MKQRLLSLDF FRGLTVAAMI LVNNPGSWSY VYPPLEHSKW NGCTPTDLVF PFFLFMVGVS VTFALSSRKA DVSGHTSLII HIIRRAAILF AIGLAFRLIP SFDFHNLRIL GVLQRISIVF LVISLLYLKT GTKPRIWLCI SFLVIYWLLM TVVPVPGYGP ANLEAETNLA AWIDRTVLGE QHLWKQARTW DPEGLLSTLP AISTGLLGIM TGDWLRRKDV ADADKVSWLF AAGFLSVIAG LIWDGFFPIN KSLWTSSFVL YTGGLAAMGL ALSYWLIDVQ QYKSITPPFV AFGRNAITAY VLSGAIPMIF KGMSGGMFRA YGAFLSPFNA SLAAAITLVI LMFIPVWIMY KRNIIVKI
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