Gene Cpin_6469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6469 
Symbol 
ID8362653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8128914 
End bp8129990 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content48% 
IMG OID644968597 
Producthypothetical protein 
Protein accessionYP_003126074 
Protein GI256425421 
COG category[S] Function unknown 
COG ID[COG4299] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00127686 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAA GGCTCCTTTC GCTCGACTTC TTCCGCGGAT TAACTGTCGC TGCCATGATA 
TTGGTGAATA ATCCGGGAAG CTGGTCGTAT GTCTATCCGC CACTGGAACA TTCAAAATGG
AATGGCTGTA CACCAACAGA CCTGGTTTTT CCTTTCTTCC TCTTTATGGT CGGTGTATCG
GTTACTTTTG CGCTGAGCAG CAGGAAGGCT GATGTCAGCG GACATACCTC ACTGATCATT
CATATCATCC GCCGTGCGGC GATACTTTTT GCTATCGGAC TGGCTTTTCG TCTGATCCCT
TCTTTTGATT TCCATAATCT GAGGATTTTA GGCGTATTAC AGCGCATTTC TATCGTTTTC
CTTGTTATTT CCTTACTATA CTTAAAAACG GGCACTAAGC CCCGTATATG GCTCTGCATT
TCGTTCCTGG TGATCTACTG GCTGCTGATG ACAGTGGTCC CGGTACCCGG GTATGGTCCG
GCCAACCTGG AAGCGGAAAC CAATCTGGCT GCCTGGATAG ACAGAACAGT ACTGGGAGAG
CAGCATCTCT GGAAACAGGC CCGCACCTGG GACCCTGAAG GATTGCTTAG TACACTGCCT
GCGATATCCA CAGGATTGCT GGGTATTATG ACCGGCGACT GGTTACGCAG AAAAGATGTG
GCGGATGCGG ATAAGGTGTC CTGGTTGTTT GCAGCAGGTT TTCTGTCTGT TATCGCAGGG
CTGATATGGG ATGGCTTTTT CCCGATCAAT AAATCATTAT GGACAAGTTC CTTTGTTTTG
TATACAGGCG GACTGGCAGC TATGGGCCTT GCACTTTCTT ACTGGCTCAT CGATGTGCAA
CAGTATAAAA GTATCACGCC TCCTTTCGTA GCATTCGGCC GTAATGCGAT CACCGCCTAT
GTTTTATCCG GCGCCATTCC TATGATATTT AAAGGTATGT CCGGCGGTAT GTTCCGCGCA
TATGGCGCTT TCTTATCTCC GTTCAATGCA TCCCTTGCAG CGGCGATCAC CCTGGTCATC
CTGATGTTCA TACCAGTATG GATCATGTAT AAAAGAAATA TAATCGTAAA AATCTGA
 
Protein sequence
MKQRLLSLDF FRGLTVAAMI LVNNPGSWSY VYPPLEHSKW NGCTPTDLVF PFFLFMVGVS 
VTFALSSRKA DVSGHTSLII HIIRRAAILF AIGLAFRLIP SFDFHNLRIL GVLQRISIVF
LVISLLYLKT GTKPRIWLCI SFLVIYWLLM TVVPVPGYGP ANLEAETNLA AWIDRTVLGE
QHLWKQARTW DPEGLLSTLP AISTGLLGIM TGDWLRRKDV ADADKVSWLF AAGFLSVIAG
LIWDGFFPIN KSLWTSSFVL YTGGLAAMGL ALSYWLIDVQ QYKSITPPFV AFGRNAITAY
VLSGAIPMIF KGMSGGMFRA YGAFLSPFNA SLAAAITLVI LMFIPVWIMY KRNIIVKI