| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6466 |
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| Symbol | |
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| ID | 8362650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8123618 |
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| End bp | 8127061 |
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| Gene Length | 3444 bp |
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| Protein Length | 1147 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644968594 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003126071 |
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| Protein GI | 256425418 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000431216 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATTT TGAACCAAAA TCTCGTTTTG GGGCTGCTCT CTTGTGCCCT GCTGCCAGGT
ATTGCCATAT CTGTCAGCGC ACAGACGCCC TCGATGTATG CCATGAGGCA GTCTGATAAG
ATCCCTGTAA AACACGTATC TGCCACTGTG TCCCTTAAAG AAGCTTTAAT AAAGCTAAAG
AAATTTCAAA ATGTCCGTAT CGCTTATAAA GAGGGATTAC TGGATGGGAA ACTGATATCA
GCAGAACTAA TGGAAAAAGC GGAAAGCATG GAGACAGAAG CAGCATTACG CCTGCTCTTG
TCTGACTTTG CGCTTGCTTA TATGCGTGTC AATAAAACAC AATATTCTAT ATATACACCT
TCAGCATCCA CTATCCTCAA CGTGAACAGT CTGATGGCTG ATAAACTGAA AGGTAAAGTA
ACCGGTCCTG ATGGTTCGCC TGTACCTGGT GCAAGCATTG TACTCAAAGG TAATTCCAAT
GTGGCAGCTA TGGCCGGTCC TGATGGTAGC TTCGAACTGA ACCTCAAAGG CGCTACACCG
CCTTTTGTAC TGGTGATCAG CTCCATGGGT TTTGCTAAGA AAGAAGTAAA TGTAACCGAT
GCTGATGCGC CACTGGCTAT CAGTCTGGCA GAATCGAATG AATCATTATC TGAAGTAGTA
GTGACGGCAT TGGGTATCAG AAAGGAAAAG AAAGCCCTGG TATACGCAGT ATCTGAAGTA
AAAGGTAGTG AATTCACACA GGCACGTGAA GTGAACGTTG CAAATGCATT GAGCGGAAAG
ATTCCTGGTG TGAATGCAAC CAGTCTGGCG AGCGGTCCTG GTGGTTCCAG CCGTGTCATC
ATCCGTGGTA ACAGCTCATT GGGTAGTAAT AACCAGCCAC TGTATGTAGT GAATGGTATG
CCGATCGATA ATACGACACC GGGTGGTGCG CCGACTACAG GTGGTGGCGG ACAAAACGTA
GACAGAGGCG ATGGTATCGG TGGTATCAAC CCGGATGATA TCGAAACTAT CAGTGTACTG
AAAGGTGGAT CTGCTGCGGC GCTGTATGGC TCCCGTGCTG CAAATGGTGT GATTGTGATT
ACCACTAAAA AAGGTCGTGC ACGTAAAGGT ATCGGTGTTG ATTACAATAC AACCATGACA
TTGGAATCGC CTGCTGTATT GCCTGACTGG CAGTATGAAT ATGGTCAGGG TGACAAAGGT
CTGAAGCCGA CTTCACAGGC AGAGGCGATC ACCTACGGCC GCCGTTCATG GGGTACTAAA
ATGGATGGTA CAGAATATGT AGCTTTCGAT GGGAAAATGC ATTCATATAC TCCACAGAAA
GATAATATCA AAAACTTCTA CCGTACCGGA TCTACTTTTA CCAATACAGT AGCCTTCAAC
GGTGGTAGCG AAGCAGTAAA TTTCCGCTTC TCCCTCTCAA ATACCAACAG TAAAGCTATC
ATTCCAAATT CAAAGTTCGA CAAGAAGATT GCGAACCTGA ACCTGAATGC TTTCCTGGGT
AAAAAACTGA GCATAGAAGC TATAGCGCAA TATAATGTTG AGAATGCAAC CAACCGTCCC
AGTTCCGGGG ATGCCACCGG TAACCCCAAC TGGGGCGTTT ATATGGTAGC CAACACAGTT
GACGTACGCT GGATGGATCC GGGTTATGAT GAAACCGGTC GTGAGATCCA GTGGAATGAA
ACAGCCTACG CTTCCAACCC TTATTTTGTT GTCAACAGAT TTAAAAACAA CGATACCAAA
AACCGTTTCA TCGGTCAGGC CAGCGTTAAA TATGATCTGC TGAAAAATCT CTACGTAAAA
GGAACAGTGA GCCGTGACTT TTTTGATTAC AACTACATCG GTATCATCCC AACCGGTACT
GTGTACACAA CCGGCGCAGC AGGTGAATAC AGTGAACTGA GAAACTCTGT AGCTGAAACT
AACTCTATGG TAACTGCCGG TTACAACACC AAGATCGCAG GTAACATCGG CGTGAATGCT
TTGGTAGGTG CTAATGCCCG TCGTTTTAAT ACCAACCAGA CGGCTATTGC AGGTACACAG
TTTATCATTC CGTTCTTCTA CAGCTCTACT AACCTGACCA CCTCTACAAC TACGCCAACA
AGAGGTAAAG TAGCGACCAA CTCAGTATTT GGTTCCCTGG ACCTGGATTA CAAATCCATC
TTCTTCCTGA ACTTTACAGC GCGTCAGGAC TGGTTCTCCA CACTGAGTCC ACAGAGCAAC
AGCATTCTAT ATCCTTCAGT AGGTGGTAGC TTTATCCTCT CTGATGCGGT GAAGATGCCA
AAGGCAATCA GCTTTGCAAA ACTGCGTGCT TCATGGGCAC AGGTAGGTGG TGCAACGCCG
GATCCATATA TCCTGAATCA GACATATACG ATGTTACAGG GAGGTCACCT GGGTCGTCCG
GTACAGCAGG TAACGCAGTC TAATGCAGTG AACCTGGTAA CCAACTCTAC CCTGAAACCA
TTGACCTCTA CTACATATGA AGTTGGTGGT GAAGCGCAGT TCCTGAATAA CAGATTGGGC
ATTGACCTGA CGTACTACAA GAAACAGACG ACAGACGATA TCGTAAGCAC TGCGATCTCT
ACCGCCTCCG GTTATAACAA TGCGTTACTG AACGTAGGTA AACTCTCCAA CAAAGGCGTT
GAATTACTCC TGACAGGTAC GCCAATCAAA CGTAAAGACT TTTCCTGGAA TGTGAGCTAC
AACATGGCCT ACAATGTCAG TAAAGTAGAA CAGCTGGCTG CAGGTCTGAA TACCCTGCAA
ATGGCGACAA GCGTAGGTAG CTGGGCATTT GTACACAACA CAGTAGGACA GCCTTATGGT
ATCATCATGG GTTACACTAC TGTACAGAAT GAAAAAGGAC AGACCGTTTA CAACAGTACC
TCCGGCTATG AGCAGAAAAG TGAACTGAAA GCATTAGGCA GAGGTGTACC GCCGCTGACA
ATGGGTCTGA GCAACACGTT TAACTACAAA CGCCTGTCCC TCGACATCCT GGTAGACGGC
AAGTTTGGCA ACAAAGTATT CTCCGGTACG GATGTATATG CGACCCGTTT TGGTCTGCAC
AAGAAAACAC TCGTAGGCAG AGAAAATGGT ATTGAACTGA ATGGTGTGGA TGAAAAAGGA
AATGACTATC ATAACACGAT TCCGGTAGCC AATCTGCGTC TTTACTACGA TAACACGAAG
AACTACACGG ATCATTTCCT GTATGACGGC AGCTTTGTGA AATTACGCCA GGTGGTATTC
AGCTACCAGA TTCCGGTAGC GAAACTCAAA ATCGTACAGA GTGCTTCCTT GTCTTTCGTA
GCACGTAACC TGCTGATCCT TTACAAGAAG ACCGACAACT TCGATCCGGA ATCCAGCTAC
ACAAACGGCA ATGCACAAGG TTTCGAAGCA TTTGGTATGC CTCGTACAAG AAGCTTTGGT
GCTAACCTGA TGGTGAAATT CTAA
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| Protein sequence | MNILNQNLVL GLLSCALLPG IAISVSAQTP SMYAMRQSDK IPVKHVSATV SLKEALIKLK
KFQNVRIAYK EGLLDGKLIS AELMEKAESM ETEAALRLLL SDFALAYMRV NKTQYSIYTP
SASTILNVNS LMADKLKGKV TGPDGSPVPG ASIVLKGNSN VAAMAGPDGS FELNLKGATP
PFVLVISSMG FAKKEVNVTD ADAPLAISLA ESNESLSEVV VTALGIRKEK KALVYAVSEV
KGSEFTQARE VNVANALSGK IPGVNATSLA SGPGGSSRVI IRGNSSLGSN NQPLYVVNGM
PIDNTTPGGA PTTGGGGQNV DRGDGIGGIN PDDIETISVL KGGSAAALYG SRAANGVIVI
TTKKGRARKG IGVDYNTTMT LESPAVLPDW QYEYGQGDKG LKPTSQAEAI TYGRRSWGTK
MDGTEYVAFD GKMHSYTPQK DNIKNFYRTG STFTNTVAFN GGSEAVNFRF SLSNTNSKAI
IPNSKFDKKI ANLNLNAFLG KKLSIEAIAQ YNVENATNRP SSGDATGNPN WGVYMVANTV
DVRWMDPGYD ETGREIQWNE TAYASNPYFV VNRFKNNDTK NRFIGQASVK YDLLKNLYVK
GTVSRDFFDY NYIGIIPTGT VYTTGAAGEY SELRNSVAET NSMVTAGYNT KIAGNIGVNA
LVGANARRFN TNQTAIAGTQ FIIPFFYSST NLTTSTTTPT RGKVATNSVF GSLDLDYKSI
FFLNFTARQD WFSTLSPQSN SILYPSVGGS FILSDAVKMP KAISFAKLRA SWAQVGGATP
DPYILNQTYT MLQGGHLGRP VQQVTQSNAV NLVTNSTLKP LTSTTYEVGG EAQFLNNRLG
IDLTYYKKQT TDDIVSTAIS TASGYNNALL NVGKLSNKGV ELLLTGTPIK RKDFSWNVSY
NMAYNVSKVE QLAAGLNTLQ MATSVGSWAF VHNTVGQPYG IIMGYTTVQN EKGQTVYNST
SGYEQKSELK ALGRGVPPLT MGLSNTFNYK RLSLDILVDG KFGNKVFSGT DVYATRFGLH
KKTLVGRENG IELNGVDEKG NDYHNTIPVA NLRLYYDNTK NYTDHFLYDG SFVKLRQVVF
SYQIPVAKLK IVQSASLSFV ARNLLILYKK TDNFDPESSY TNGNAQGFEA FGMPRTRSFG
ANLMVKF
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