Gene Cpin_6461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6461 
Symbol 
ID8362645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8117932 
End bp8118846 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content47% 
IMG OID644968589 
Productdemethylmenaquinone methyltransferase-like protein 
Protein accessionYP_003126066 
Protein GI256425413 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.870184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTGT TCCACTTCTT CCCATTATTG CTGGTCCCAT TTTTTCTCCG TGCACAAACA 
ATTCCAAAGG AGGAACTGGT ATTCCTGACT GCTGACTGGA AAGGAGAACG TTTTCCTGAT
GGTAGACCCA AAATACCCGA CGCCATCATA GAACAGGCGC GTACGGTGAG TCTGGACGAT
GTCTGGACCA TACTGGAAGG AGAGGGCTAT CACTGTCAGT TTGATGGAGG ATGGAAAATG
ATTTATGATA ACAAACCTAT CATAGGACGT GCAGTAACAG CGATGTTTAT TCCTGCACGT
CCGGATGTTG AAGCACATGT GAAGGAGAGA GGACAGCAGA AAGGTTTTAA AGGTAATAGT
AATTCCTGGC CTATACAGCA ATTGAGCAAA GGTGATGTGT ATGTGGCAGA TGGTTTCGGG
AAGATTGCGG ACGGTACTTT GATAGGTTCT ACACTGGGGA ATGCTATCTA TGCCCGATCT
GGTAACGGCG TGGTATTCGA TGCTGCTGCA AGAGACCTGG AAGGACTGAA AGAAATTGAA
GGATTCAATG CATTGGTAAG AGACTGGGAT CCTTCTTTTC TGAAGAATGT AATGTTATCG
GGTTTGAATG TGCCGGTGCG TATCGGTCGT GCGGTGGTAT TACCTGGTGA TCTTGTCTTA
ACCTCCAGTG AAGGGGTGGT ATTCGTACCG GCGCATCTTG CAGAAAAGGT GATAGGGATC
GCTGCTTTTA TCCAGGTAAA AGATAAGTTC AGTTTTGAGA TGCTGAAGGC AGGTAAGTAT
ACGCCCGGTG AGCTTGACAA TAACTGGCCG GATGCGATCA GACAAGCCTT CCTGGACTGG
CAGCACAAAC AACAGGGACA ACAACCTATG ACTCGTCAGG CACTCGACAA AATGTTAGAG
AAGCGGACCT GGTAG
 
Protein sequence
MKLFHFFPLL LVPFFLRAQT IPKEELVFLT ADWKGERFPD GRPKIPDAII EQARTVSLDD 
VWTILEGEGY HCQFDGGWKM IYDNKPIIGR AVTAMFIPAR PDVEAHVKER GQQKGFKGNS
NSWPIQQLSK GDVYVADGFG KIADGTLIGS TLGNAIYARS GNGVVFDAAA RDLEGLKEIE
GFNALVRDWD PSFLKNVMLS GLNVPVRIGR AVVLPGDLVL TSSEGVVFVP AHLAEKVIGI
AAFIQVKDKF SFEMLKAGKY TPGELDNNWP DAIRQAFLDW QHKQQGQQPM TRQALDKMLE
KRTW