| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6451 |
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| Symbol | |
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| ID | 8362635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8107020 |
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| End bp | 8109008 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644968579 |
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| Product | DNA primase |
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| Protein accession | YP_003126056 |
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| Protein GI | 256425403 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.6099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATTTCAC AGAATACCAT ACAACAGATA CTCAGCCGGA TTGACATTGT GGAGATAGTA
GGCAATTTCG TGAAACTGAA AAAGCGCGGC GCCAACTATC TGGGACTTTG TCCGTTCCAT
AATGAGAAGA GCCCTTCCTT CACTGTTACT CCCAGCAAGG AGATATTCAA GTGTTTTGGT
TGCGGACAGA GCGGGAATGC CATTAAGTTC ATCATGGAGC ATGAGAAGTA TTCTTATGTG
GAAGCACTGC GCTGGCTGGC GCAGAAATAT GATGTTCCGA TTGAAGAAAC AGAGGTAAGT
CCGGAAGTCA GACAGCAGCA GCTGATGGCT GACAGCCTCT ACATCATCAA TAATTTCGCA
CGCGAATACT TTTCCAATAC CCTTTTCAAT ACAGAAGAAG GTCAGAATGT CGGGCTAAGT
TACTTTGAGG AACGCGGTTT TACACAGGAG ACCATCCGCA AGTTTCAGCT GGGTTACAGT
CTGAACACCT GGGATGCTTT TACTAAAACC GCCCTTGCCA AAGGTTATAA TCTTGATTAC
CTTCAGAAAA CAGGGCTGGT CACCGTCAGG AATGAGCAAC CCGGCGATAA CTACCGTGGT
CGTGTGATCT TCCCCATCCA TAACCAGAGC GGAAAGGTAT TGGGATTTGG CGCCCGTATC
CTGGTTAAAA ACGACCGTGC GCCGAAGTAT GTCAACTCAC CAGAGAACGA GATCTACGTT
AAAAACCGGG TACTGTATGG TACTTACTTT GCCCGGCACG CGATTGATAA ACTGAATGAG
TGTCTGCTCG TAGAAGGTTA TACGGACGTC GTCTCCCTGC ATCAGGCGGG TATTGAGAAC
GTGGTGGCGT CCAGCGGCAC CTCCCTTACG CAGCACCAGC TCAGGCTCAT TAAGAAATAT
ACCAACAACC TCACCATCCT TTTTGACGGG GACAATGCGG GCGTAAAAGC GGCATTGAGA
GGCCTGGATA TGGCCATCGA GGAAGGCCTG AACGTAAAAC TCGTTTTAAT CCCCGATAAG
GAGGATCCGG ACAGTTACGT ACAGAAGATA GGTGCAGACG CTTTTCGTGA GTTTATTGCC
AATAATAAGC AGGATTTCGT ACTGTTCAAG CTACAGATCT CCATGCAGGA GGCAGGCAAT
GACAGTAGCC GTAAATCACA GCTGGTAAAT GAGATCGCGG AGACCATTTC CAAGATCGAT
AAAACGGAGG ACTTCACCAG GCAACAGGAT TACATCCGTC AGTGTAGTCA GTTGCTGAAG
ATCGACGAAC AGGGGCTTAT TAACCTGGTC AATAAATTCA TCCGCGAGCG TTTCCAGAAG
AAAGAGCAGC AATTCAACCG GGAGAACAAT AATAATAACA ATGCTGCTCC TGCCATGGAC
GACGATCTGT CTCCGGAGGC CATTGCCGCT ATGGAGGCGA TGGAAAATGG CGGGGAACCG
GCAGTTAACT TCTTCAATCC GGATGAAAAG CAGGAAAGAG AATTAGTGAA GATACTCCTG
CGTTTTGGCG ACAAACCTTT CAGTGAGGAA GATCAGAGTA CGGTGGCAGA TTACATTTTC
CACCTTCCCT ATGATTTTGA ATCACTGGCG GATAATGAAA TGGTGAAACG TATACTGCGG
GAATACAAAG TGATGTATGA CCAGGATAGT CTGCCGGATA AAAAATGGTT CCTCTATCAC
AATGATCAGG AAGTGGCAAC GCTGGTAGTG GCTATTATGG AAGATAAGGA AGCTGAGCTT
AGCACTGCCT GGAAAGATAA GTTTGAGATT GATACCGTGT ATGGTGATAA TGCTTATCTG
AAAGATACTA TCTCTACTAC GAATTACCTG ATTTTAAGAA AGATCCGGAA GATGATCATG
GAGAATCAGC AGGAGATGGA GCGATCTACT GTATTTGAAG ACCAGATCAA ATGTATCGAG
ATGCACAAGC ACCTGAAAGT ACTGGAAAAC GAACTGACAC AGGGACTGGG AACGGTTATT
TTCAGATAA
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| Protein sequence | MISQNTIQQI LSRIDIVEIV GNFVKLKKRG ANYLGLCPFH NEKSPSFTVT PSKEIFKCFG
CGQSGNAIKF IMEHEKYSYV EALRWLAQKY DVPIEETEVS PEVRQQQLMA DSLYIINNFA
REYFSNTLFN TEEGQNVGLS YFEERGFTQE TIRKFQLGYS LNTWDAFTKT ALAKGYNLDY
LQKTGLVTVR NEQPGDNYRG RVIFPIHNQS GKVLGFGARI LVKNDRAPKY VNSPENEIYV
KNRVLYGTYF ARHAIDKLNE CLLVEGYTDV VSLHQAGIEN VVASSGTSLT QHQLRLIKKY
TNNLTILFDG DNAGVKAALR GLDMAIEEGL NVKLVLIPDK EDPDSYVQKI GADAFREFIA
NNKQDFVLFK LQISMQEAGN DSSRKSQLVN EIAETISKID KTEDFTRQQD YIRQCSQLLK
IDEQGLINLV NKFIRERFQK KEQQFNRENN NNNNAAPAMD DDLSPEAIAA MEAMENGGEP
AVNFFNPDEK QERELVKILL RFGDKPFSEE DQSTVADYIF HLPYDFESLA DNEMVKRILR
EYKVMYDQDS LPDKKWFLYH NDQEVATLVV AIMEDKEAEL STAWKDKFEI DTVYGDNAYL
KDTISTTNYL ILRKIRKMIM ENQQEMERST VFEDQIKCIE MHKHLKVLEN ELTQGLGTVI
FR
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