| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6448 |
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| Symbol | |
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| ID | 8362632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8101439 |
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| End bp | 8104831 |
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| Gene Length | 3393 bp |
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| Protein Length | 1130 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644968576 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003126053 |
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| Protein GI | 256425400 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGT TCATTAGTGC CTTTATGGCT GCTATGGGCA TGGCATGCTA TTGCCATATG
CCAGCAGAAG GGCAGGACCT GGCCTCGCTG GGAAAACCCC TACGCCCTCT TGAAAGATCA
CAGACAAAGT CATTGAAAAA TGTGCTGGAT GGGCTTGAAG TAAAATATAA TGTGCACTTC
ATGTACAAAA GCAATCTCGC AAAATTGCAG TTGTCACATG TGGAAAACAC AAAACAATCT
TCACTGGAAG AAGAATTGAA AAACATCACC GGTCCCAATA AGCTTCGCTA TAAGAAGATG
GGTGACAGTT TCTATATCGT ATTTTCTCAG GATGATGAAC CTGCCGATGC ACCCGTTCCT
GCCGGTGAAA ATACATCTGC ACAGCTGGCG GAAACACTGG CAGTAGCAGC ACCTGCGGCA
ATCCCTGTAA GAGGTACTGT AACTGATGAC AAAGGTCAGC CGATACCGGG TGTAACCGTA
CTTGTAAAAG GTACTTCTAA TGGTACAAGT ACTGGCACTG ATGGCTCCTG GTCTTTACAG
GTACCTGATG AAAATGCCGT ACTCGAATTT TCCTTTATCG GTTATACCAA ACAGGAATTA
AAAGTAGGCA ATCGTACATC TTTCGCTGTA AAACTGACAG CTGACGTTAC TGCTATGAAT
GAAGTGGTGG TAGTCGCTTA TGGTACACAG AAGAAAATAA ACGTGACCGG CGCAATCGCT
GCGGTGGATG GGAAAGACCT GAACTGGAAA CCAGTAGGAC AGGTGTCCTC TGCACTCCAG
GGTGTTGCTT CCGGTGTAAC AGTGACTACT ATCAGTGGGC AGCCGGGTGT AGACCAGGGT
ACCGTACGTA TCCGTGGTGT CGGTACGATG AATAGTACTG ATCCATTGGT ACTGGTAGAT
GGTGTGCAGA TGAACATGAA CGATATCGAT GCAAATGATA TCGCTTCCAT GTCCGTACTG
AAAGATGCTG CTTCCTCTGC TATCTATGGT GTAAGAGCTG CTAATGGCGT GATCCTGATC
ACCACGAAAA GAGGTGCATC CGGTAAACCC AAGGTTACCT ATTCCAACTA CTTCGCATGG
CAGACGCCTG CACGTCTGGC GAAATATGTA GGCGCGAAAG ATTTTATGAA TCTGGCGAAT
CTGACTGCCT CTAATTCAGG TGGTTCTGCC TCCTATACAG CTGCGCAGAT CGCTGCATAC
GATAATCCTA ATCGTGATAA TTTCGTTAAT CCGGATAATT ACTGGCTGGA TGCTATCCTG
ACCGGTAGCG GTTTTCAACA GGAACATAGT CTGGGTATCA GCGGTGGTAC AGAAGACGTG
AAATATCGCT TCTCTACCAA TTATTTCGAT CAGACGGGTC TGATCAAAAA CATGGATTTC
AATCGTATCA CAGTACGTCT GAATACAGAT ATCAATGTCA CAAAGAAACT GACCTTCAAC
GCTGATATCG CGGCACGTCT TGGCGACAGA CAGGAGCCAC AGGGCGCTTC CGGTTCGGCA
TGGTATCAGT TCGGACAGGC AGCTATTATT AACCCGCTGT ATCCGACCAA ATATGCAGAT
GGCACATGGC CGGTGATCAG AGGTGGACAG AACCCGATCC GCCTGCAGGA AGAAGGTGGC
CTGTATCAGT ACAAAAGCAA CCTGTTTACG GGTAACTTCA AAGCTACTTA CAACCTGGTA
AAAGGTTTAA AACTGACCGG TCTTACATCC GTTAACTACA GATCCGATTA TAACAGCACT
CGTGAGAAAA CACTGATCTA TTTCAAAGAT CCAGGCACGA ACCAGGATCC GCTGCCACTC
GGACAAAACT CCGTGAAGAA AGCTTATCAG GGCTATTGGT TCCGTAACTA TCAGGGATTG
GCTGAATACA CCCAGAACTT TGGTAAACAT AACTTTACCG TATTAGGTGG TGCTTCCCGC
CTTACAGAAA CCACCGATGA TCTCAGCGGC TACAGGGTAA ATCTGGCTGG CGGACTGAAT
CAGATTGATG CGGGTGAACA GAACGGACAG ATTACAGAAG GTAACGCAGT TGCCTACTCG
CTGGTGTCTT TCTTTGGCAG ATTGAACTAC TCTTTTGATG ATAAATACCT GTTTGAAGCA
AACCTTCGTC GTGATGGTTC TTCCCGCTTC TCTGAAGGAC AGAAATGGGG GCTGTTCCCG
TCTTTCTCCG CAGGATGGCG TATTTCCGGT GAAGAATTCA TGAAAGAAGT ATCCTTTATC
AATAACCTGA AACTGCGTGG TTCATGGGGT AAACTGGGGA ATGACGTGAT CCTGGACAGA
GATAAACTGA CCACTAACTA CCCTTACCAG TCACAATATT ATTACAACAG CTATCCTTTC
GGTGGTGTAC TGAAACCAAC TGCGGGTATC ACGATCTATC CTAACTCCGG ACTGACCTGG
GAAACCACTG TGATGACCGA TGTAGGTGTG GATGGTACGA TCTTCAAAAA CCTGGATTTT
ACCTTTGACT ATTATGTGAA GAACACCAAC GACATCCTGT TGTTCCTGCC GATCGCTCCT
TCCATTGGTC TGGATCCTTC CGCGCAGAAT GCAGGTAAAG TGAGAAACAA AGGATGGGAA
ATCGCACTGA ACTACCGTGG TAAGATCGGT GAACTGAACT ATAACGTAGG CGCTAATCTG
TCTGACGTAC GTAACAGGAT CATTGATATT AAGAACACAG ACGCTATCTC AAGGGACAAT
AACTACATCT ATACAGGGCT TGTAACCGGC AATTCGATCG GTAGCTTCTA TGGTTACCAG
GTAGAAGGTA TCTTCCAGAA TGCAGCACAG GTAGCAGGAC ATGCAACACA GCCATTCCCG
ACTACAGGTG CAGGCGACCT GATTTACAAA GACCAGAATG GCGACAAACA GGTAAAAGAA
GGTGCTGTTG ATAAAGGTGG CGATATGGTA TACCTGGGTA GCAATATTCC AAGATATACT
TATGGTATTA ATCTGGGGGC AGACTATAAG AACTTTGACT TTACCGCTTT CTTCCAGGGA
GTAGGTAAAG TAGATATCCA CACCTTACCG ATTGAAAGAG CGCCAACCAA TACTGATGGT
AACTTCAGAG AAGAACACCT GAACAGCTGG ACGCCAGCCA ATACCGGTGC AGATTTCCCA
AGACTTGTAA GCACACTGCA AAACTATCAG TCTTCTTCTT ACTGGGTAAA AAGCGGCGCG
TATGTACGTC TGAAAAGTGT ACAGCTGGGT TATACATTGC CTTCTCAAAT CATGAAACGT
GCAGGCTTTG ACAGATGCCG TCTTTATGTG AGTGGCCAGA ATCTGCTGAC CTTCTCTTCT
CTTGCAAGTG ACATCGATCC GGAATCTCCG AATGATAGCA GATACTACCC GCAGGTGAAG
ACGTTCACTT TTGGATTAAA TGTGCAATTC TAA
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| Protein sequence | MNKFISAFMA AMGMACYCHM PAEGQDLASL GKPLRPLERS QTKSLKNVLD GLEVKYNVHF
MYKSNLAKLQ LSHVENTKQS SLEEELKNIT GPNKLRYKKM GDSFYIVFSQ DDEPADAPVP
AGENTSAQLA ETLAVAAPAA IPVRGTVTDD KGQPIPGVTV LVKGTSNGTS TGTDGSWSLQ
VPDENAVLEF SFIGYTKQEL KVGNRTSFAV KLTADVTAMN EVVVVAYGTQ KKINVTGAIA
AVDGKDLNWK PVGQVSSALQ GVASGVTVTT ISGQPGVDQG TVRIRGVGTM NSTDPLVLVD
GVQMNMNDID ANDIASMSVL KDAASSAIYG VRAANGVILI TTKRGASGKP KVTYSNYFAW
QTPARLAKYV GAKDFMNLAN LTASNSGGSA SYTAAQIAAY DNPNRDNFVN PDNYWLDAIL
TGSGFQQEHS LGISGGTEDV KYRFSTNYFD QTGLIKNMDF NRITVRLNTD INVTKKLTFN
ADIAARLGDR QEPQGASGSA WYQFGQAAII NPLYPTKYAD GTWPVIRGGQ NPIRLQEEGG
LYQYKSNLFT GNFKATYNLV KGLKLTGLTS VNYRSDYNST REKTLIYFKD PGTNQDPLPL
GQNSVKKAYQ GYWFRNYQGL AEYTQNFGKH NFTVLGGASR LTETTDDLSG YRVNLAGGLN
QIDAGEQNGQ ITEGNAVAYS LVSFFGRLNY SFDDKYLFEA NLRRDGSSRF SEGQKWGLFP
SFSAGWRISG EEFMKEVSFI NNLKLRGSWG KLGNDVILDR DKLTTNYPYQ SQYYYNSYPF
GGVLKPTAGI TIYPNSGLTW ETTVMTDVGV DGTIFKNLDF TFDYYVKNTN DILLFLPIAP
SIGLDPSAQN AGKVRNKGWE IALNYRGKIG ELNYNVGANL SDVRNRIIDI KNTDAISRDN
NYIYTGLVTG NSIGSFYGYQ VEGIFQNAAQ VAGHATQPFP TTGAGDLIYK DQNGDKQVKE
GAVDKGGDMV YLGSNIPRYT YGINLGADYK NFDFTAFFQG VGKVDIHTLP IERAPTNTDG
NFREEHLNSW TPANTGADFP RLVSTLQNYQ SSSYWVKSGA YVRLKSVQLG YTLPSQIMKR
AGFDRCRLYV SGQNLLTFSS LASDIDPESP NDSRYYPQVK TFTFGLNVQF
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