| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6447 |
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| Symbol | |
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| ID | 8362631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8099844 |
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| End bp | 8101427 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644968575 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003126052 |
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| Protein GI | 256425399 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAT TATCAATAAT ACTCGCACTG GCAGGTCTGG CATCGGTGTC AGCCTGTAAA
AAAGTACTGG ACGAACAGCC GCAGGATGCT GTGAGCCGGG AAACGTTTTG GTTGACAGAA
GATGATGCGA TCAACGCTGT CAATAACTGC TACCGTCGCC TGGGGGATGT GGATAACCGC
ATGTTTATCT CCTGTGTGAC AGACGATAGC TATGCCTGGA GTAACTGGCC CAGCGATGCG
ATCTATGTGG GAAATGGTAG TGCTTCTATC AGTACCGGCA TGTTCGACAA CTTCTGGAGC
AACTTTTACA AGATGATCGC TTCCTGTAAT GATGTACTGG AAAATATTGA CAGAGATAAA
GCATTATCTG AAGCCATGCT GACCCGACTG AAAGGAGAGG CCCGCTTTAT CAGAGCTTAT
GCTTATCAGC AGCTGATCGG GTTGTATGGA GATGTGGTAT TAAGAACTAC TATTTCGCCA
ACCAGCGAGT TTGTGATGAA GCGTACTTCC CGTGCAGATG TAGCAGCATT TATCGTGAAA
GAACTGGACG AGATCAGTGC TGCTTTACCG GTATCATATG ATGCAGGAGA GGAAGGCCGC
GCCACCCGTG GTGCAGCGCT GGCATTGAAA TCCCGTGTAT TACTTTATGA AGGACAATAT
GCAGAAGCGG CTACGGCAGC ACAGGCTGCG ATGACCCTGG GTACTTACAT CATCGATCCA
AATTACCTGA GTCTTTTTGA TGGTACCAAC AAAAACAGCC ATGAGATCAT CTTCTCTGCA
CGCTATGTGA AAAACACACA GCCTAATGCG ATGGCTACCT GGGTTGGCGG ACCTTCACTG
GGTGGATGGT CAGAGATTAC GCCATTGCAA TCACTGGTAG ATGCCTATGA GTGTACAGAC
GGTCTGACAA TCGACAAGTC AGCTACCTAT GACCCGGCAC ATCCGTTTGA TAATCGCGAC
CCACGTCTGA AAATGACCGT GGTAGTGCCA GGGGTACAGG TGAATGACGT AACCATCGAT
GTGACCAAAC TGAATAGTCT GGATGCATTG GGCAAAGGAA ACGCATCTTT CACTGGTTAT
TACTACAAGA AATATGTCCC TCGCGATATT CAGGGTAACT GGGATAATAA CTCCTACAAC
GACGTGGTGT TAATGCGTTA TGCAGAAGTG CTGCTCAATT ATGCGGAAGC TAAAATTGAA
GCCAACCAGA TTGATCAGTC CGTATATGAC GCTATCAACC AGGTAAGACA AAGAACTGAT
GTAATGATGC CTGTTCTGAC AGCTGCGAAG GTGAGCGGAC AGGTAGCCCT GCGGGAAGCG
GTGAGAAGAG AAAGAAGAGT AGAGTTCCCG CTGGAAGACA ACCGTCTGTT TGATATCCGT
CGCTGGAAGA TCGCAGAAAC GGTGATGGCA GGACCGGCAT ACGGTATCCT GAACAACTTC
GATGCGAACA GGAAGGATGA TTATGGTAAA CATGTACTGG CGGAACAACG TAGTTTCCAG
GTACCACGTG ATTATCTGTG GCCGGTACCG CAGCGTGAGG TGTCCCTGAA TGCGGCTGTA
TTGCCTAATA ATCCGGGCTG GTAA
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| Protein sequence | MKKLSIILAL AGLASVSACK KVLDEQPQDA VSRETFWLTE DDAINAVNNC YRRLGDVDNR
MFISCVTDDS YAWSNWPSDA IYVGNGSASI STGMFDNFWS NFYKMIASCN DVLENIDRDK
ALSEAMLTRL KGEARFIRAY AYQQLIGLYG DVVLRTTISP TSEFVMKRTS RADVAAFIVK
ELDEISAALP VSYDAGEEGR ATRGAALALK SRVLLYEGQY AEAATAAQAA MTLGTYIIDP
NYLSLFDGTN KNSHEIIFSA RYVKNTQPNA MATWVGGPSL GGWSEITPLQ SLVDAYECTD
GLTIDKSATY DPAHPFDNRD PRLKMTVVVP GVQVNDVTID VTKLNSLDAL GKGNASFTGY
YYKKYVPRDI QGNWDNNSYN DVVLMRYAEV LLNYAEAKIE ANQIDQSVYD AINQVRQRTD
VMMPVLTAAK VSGQVALREA VRRERRVEFP LEDNRLFDIR RWKIAETVMA GPAYGILNNF
DANRKDDYGK HVLAEQRSFQ VPRDYLWPVP QREVSLNAAV LPNNPGW
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