Gene Cpin_6439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6439 
Symbol 
ID8362623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8091751 
End bp8092566 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content49% 
IMG OID644968567 
ProductSerine O-acetyltransferase 
Protein accessionYP_003126044 
Protein GI256425391 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1045] Serine acetyltransferase 
TIGRFAM ID[TIGR01172] serine O-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.101352 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.982088 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAAC TTTTAGAAGA ATTAAGGCGG AGACACCAGT TGGCTGCGGC TACTGCTTAT 
CCTCCTACCA GTGCGGTGAA CGACTTTGCC AACAACTTTA TAAACTGGCT TTTTCCGGAA
TACACCGGAA AAGTGATGTC TGATATTGTA TTACTGGAAG AATACGCGCA TATGTTGCAG
GGTGAACTGC AGCATATGTT GTCGCCGATG CAACAGCAAC TGCCTGCTCC TGCAGAAGAA
CTAAGCCGTC AGTTCATGGA CCAGGCAGCC GTTATCTATG ACGCCTTACA GAAAGATGCA
GAAGCTATCT ATAAAGGCGA TCCTGCGGCC ACCTGCATGT ATGAAGTCAT CAGGGCTTAT
CCGGGCTTTT ATGCCATCGC ATTCTACCGT ATTGCACACG CGCTTCATCA GCTGAAGATA
CCGCTGTTGC CCCGTATGAT CACAGAACGG GCGCATAGCT GTACAGGCAT CGATATACAT
CCGGCAGCGG TTATCGCGCC GTATTTCTGC ATCGACCATG GTACCGGCAT CGTCATCGGA
GAAACGACCG TCATCGGCTC CAATGTCAAA CTATATCAGG GTGTGACACT GGGCGCATTG
AGCGTGGACA AGGACATGGC CCGCAGCAAA CGCCATCCTA CCATTGAAGA TCATGTTATT
ATATATGCCG GCGCCACCAT TCTGGGCGGC GATACCGTGG TAGGACACCA TAGCATTATT
GGTGGTAATG TATGGCTTAT TAAAAGTACT GCCCCCTTCA GCCGGATCTA TTACCGGGCT
GACGGCAGTG TTAACGTAGT AGAAAATAGT TATTAA
 
Protein sequence
MQQLLEELRR RHQLAAATAY PPTSAVNDFA NNFINWLFPE YTGKVMSDIV LLEEYAHMLQ 
GELQHMLSPM QQQLPAPAEE LSRQFMDQAA VIYDALQKDA EAIYKGDPAA TCMYEVIRAY
PGFYAIAFYR IAHALHQLKI PLLPRMITER AHSCTGIDIH PAAVIAPYFC IDHGTGIVIG
ETTVIGSNVK LYQGVTLGAL SVDKDMARSK RHPTIEDHVI IYAGATILGG DTVVGHHSII
GGNVWLIKST APFSRIYYRA DGSVNVVENS Y