Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6435 |
Symbol | |
ID | 8362619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 8087577 |
End bp | 8088062 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644968563 |
Product | CMP/dCMP deaminase zinc-binding |
Protein accession | YP_003126040 |
Protein GI | 256425387 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0295] Cytidine deaminase |
TIGRFAM ID | [TIGR01354] cytidine deaminase, homotetrameric |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0667145 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.662331 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATCC GCAAACACTC TTTCGAATAC CATACTTTTC CTGACAGTGC AGCCTTACCC ACTGCCGATC TGCGTTTACT GGAAGAAGCC CGTGAAGTGA CCGCCCAGGC TTATGCTCCA TATTCTAATT TCTATGTAGG TGCTGCTATA TTACTGGCCA ATGGCATTGT TGTAAGGGGG ACCAACCAGG AAAACGCCTC TTTTCCTGCC GGTATCTGTG CTGAAAGAGT GGCCCTGTCT ACAGCTGCAT CGCTGTATCC CGGGGTACCT ATTCTCACAA TTGCTGTCAG TTACCATAAC CCGAATGGCA GTAATGACGC CCCGATATCT CCCTGTGGCA TCTGCCGTCA GACCCTTTTG GAGTATGAAG GCCGTCAGCA ACAGGCCATC AGGATCATTA TGGGCGGGCA GACCGGAAAA GTATTTGTTA TCCCTACAAT CAGACATCTT CTTCCCCTGG CATTCACAGC AGAGGATATG CAATAA
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Protein sequence | MDIRKHSFEY HTFPDSAALP TADLRLLEEA REVTAQAYAP YSNFYVGAAI LLANGIVVRG TNQENASFPA GICAERVALS TAASLYPGVP ILTIAVSYHN PNGSNDAPIS PCGICRQTLL EYEGRQQQAI RIIMGGQTGK VFVIPTIRHL LPLAFTAEDM Q
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