| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6434 |
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| Symbol | |
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| ID | 8362618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8086849 |
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| End bp | 8087541 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644968562 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_003126039 |
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| Protein GI | 256425386 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4235] Cytochrome c biogenesis factor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.257359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.680724 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGAATA TCCGTATCTT ATGTCCTTTG TTATGGGCTA TCCTATTTGC GCAAGTTGTT
ATGGCTTTTC CTGGAAATAA ATTAAAGAGT CTTTACAAAG AAGGTATCAG TTACCGGCAT
GCCGGTGAAC TTGATGCTGC AAAGAAGTGC TTTAAAGAAA TTTTACGTCG TGACAGTGGT
TATGCGTCAG CTTATCTGCA GCTGGCGGAA ATTTCCGTGC TGGAAGAGGT GTATCCGGAA
AGTATTACCT GGTACAGGGA ATACCTGCGG CTGGAAGATG ACCGGCCTGC TGCCTGGTAT
GCCATTGGCG TACTTTATTT CAATACAAAA GACTTCCGTG CTGCTGTACA TGCATTTGAA
ACAGCCACAA AAAAGGGACG CCGGCAGGAT GCGGATTATT GTCTTACACT CGGGACGGCA
TATCTGCATA TCAAAGAGAC AGGGAAAGGG ATACAACATC TGAATACCTG TCTCGAATTA
CGTCAGGACG ATACCCGGGC TTTACAGGCA CTGGCGCATC ATTATTATCT TGTGGGTGAA
TATGTGGCTG CTGTCATTTA CTGGGATCGT TTACTGCGGA TACAGCCTGC AAACGCATTC
GCCATGTTCC TGTTGGGTAA ATCGTATATT GGTAAAGGGG AGATAGCAAA AGGAGAAGCC
TTGTGTGATA AGGCATTACA GGTTGTTCAA TAA
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| Protein sequence | MLNIRILCPL LWAILFAQVV MAFPGNKLKS LYKEGISYRH AGELDAAKKC FKEILRRDSG
YASAYLQLAE ISVLEEVYPE SITWYREYLR LEDDRPAAWY AIGVLYFNTK DFRAAVHAFE
TATKKGRRQD ADYCLTLGTA YLHIKETGKG IQHLNTCLEL RQDDTRALQA LAHHYYLVGE
YVAAVIYWDR LLRIQPANAF AMFLLGKSYI GKGEIAKGEA LCDKALQVVQ
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