| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6428 |
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| Symbol | |
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| ID | 8362612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8076837 |
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| End bp | 8078237 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644968556 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003126033 |
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| Protein GI | 256425380 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC AGCTTTCTAT ATATACTTAC ATCTTACTAT TTGCCGGCGC CGTTATGACC
AGTTGTAAAA AGCTGATCGA GATAGATGCG CCGGCCGATC AACTGGTGAC CAGCAGCGTC
TTTCTGGATA CACTTACGGC AGATGCAGCT CTTTTGGGTA TGTATTCCAG AGCGGCCAAT
CCCAATCCGG GCACGGATAT GGCCACTGCA ACCAGTATGT TCAACAGTAT GTCTGCTGAT
GAAACATACT GTTACATTTA TAACTTCTAT GATGATTTTA CAAATAACGC CCTGACGCCA
CAGCTCTATT ATGTAGATGG CTTATGGAGT ACTTTGTACA ATAACATTTT CACGGCTAAT
TCAGTCATTA CAGGACTCAG TGACTCTCCA CTTCCGGAAG GTTATAAAAC GCGCTGTACC
GCTGAAGCTA AGTTCATGCG CGCATTGAGC TACTTCTACC TGGTAAATGA GTTTGGTGCA
GCGCCATTGG TCATGTCTAC AGATGTGCAT AATACTACCA GACAACCACG CGACAGCGTC
AATGTTGTAT ACGATCAGAT AGAGAAAGAC CTCACCGAGG CACAACAGGC ACTTCCTGCT
ACCCTGGACC TGTATGGCGG TAAAAGGATA CGTGCGACTA CCTGGGCAGC GAACGCCCTG
CTGGCGAGAG TATATCTCTA CAGGGGCAAA TGGCAGCAGG CAGAAAACAT GGCCACTACC
GTCATCAATA ATCCAGGTTT ATTCCGCATG AAAGAAGACC TGAGCCAGGT TTTCCTGGCG
AACAGTGAAG AAGGCATATT ACAATTCGTG AATGGTATCA CCAGTTCCTG GCTGGCCAAT
AACTTTGTAC CATTCGCAGC CAGTCCGACG CCAAAGTTCG TGCTGAAAGA TGGGCTATAT
ACCGCCTTCG AAACCGGCGA CAAACGTAAA GACAACTGGG TAGGCATTAA AACATATGGT
GGTGTAGACT ACCCTTATCC TGCTAAATAC AGGTATATGT CAGGCGTGGG TGCAGTGGAA
CACATGCAGG TATTACGCCT GTCAGAGCAA TACCTGATCC GTGCGGAAGC CAGAATGCGC
CGGCAGAAAT TTAACGAAGC AGCTACAGAT ATCAATACTG TCCGTGCAAG AGCAGGACTT
TCACAGACAA CGGCTACAGA TGCGTCTTCT TTGACGACAG CCATTGAGCA TGAGCGTAGA
ATAGAATTTT TCTGCGAATG GGGACAGCGC TGGCTGGACC TGAAACGTTG GCCTGGAGTA
GCGAATACCA GCATTACACG GGCAGATGAA GTATTATCTG CACTAAAGGG TAACCAGTGG
CAGGCAACCG ATGTTTTTTA TCCTATCCCG CAGTCACAAA TCAATGCCAA TTTAAACCTT
AGTCAAAACC CAGGATACTG A
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| Protein sequence | MKKQLSIYTY ILLFAGAVMT SCKKLIEIDA PADQLVTSSV FLDTLTADAA LLGMYSRAAN
PNPGTDMATA TSMFNSMSAD ETYCYIYNFY DDFTNNALTP QLYYVDGLWS TLYNNIFTAN
SVITGLSDSP LPEGYKTRCT AEAKFMRALS YFYLVNEFGA APLVMSTDVH NTTRQPRDSV
NVVYDQIEKD LTEAQQALPA TLDLYGGKRI RATTWAANAL LARVYLYRGK WQQAENMATT
VINNPGLFRM KEDLSQVFLA NSEEGILQFV NGITSSWLAN NFVPFAASPT PKFVLKDGLY
TAFETGDKRK DNWVGIKTYG GVDYPYPAKY RYMSGVGAVE HMQVLRLSEQ YLIRAEARMR
RQKFNEAATD INTVRARAGL SQTTATDASS LTTAIEHERR IEFFCEWGQR WLDLKRWPGV
ANTSITRADE VLSALKGNQW QATDVFYPIP QSQINANLNL SQNPGY
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