| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6424 |
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| Symbol | |
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| ID | 8362608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8070223 |
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| End bp | 8071233 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644968552 |
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| Product | Mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_003126029 |
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| Protein GI | 256425376 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0110066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAATTGA CACTATACCC ATTTGAACTA AAGTTTAAAC ATACATTCAC CATTTCGCGT
AAATCCAAAG ATGTACAGCC ATTACTGGTC GTTAAACTGG AACAGGATGG TTTTAGCGGA
CTGGGAGAAA CGGCCGACAA CTCATACTAC AATATGACAG TGCCGCGTCT GATGGAAGAT
ATCAATGCAC ACAGAGACCT GATAGAAGGA TATACACTCG ATACACCGGA GGAACTGTGG
AAGACGCTGT TCCCTTTGTT TAAAGACAAT CTCTTTGCCC TCTGCGCCAT TGATCTGGCA
GCGCATGACC TTTATGCCAA AAAACAAGGG AAGAAGCTAT ATGAGGTATG GGGGCTCGAC
ATCTCTCATA ATCCCATGAC AGACTATACG ATTGGCATAG ATACGGTGGA GAATATGGTC
AGCAAACTGA AGGAGTTTCC ATGGCCCATT TACAAGATTA AACTGGGAAC CAAAGAGGAT
ATTGCTATCA TTGAAGCACT GAGAAAGCAT ACCAATGCGA TCTTTCGTGT AGACGCCAAT
TGCGCCTGGG GAGTGGAAGA AACCCTGCGT AATGCGGCTG CGTTTAAGTC ATTGGGTGTT
GAGTTCATAG AACAACCCAT GCCGGCAGCT GATATAGATG GGATGAAACA GGTGTATGAA
CAATCCGCCT TACCGCTGAT TGCGGATGAA AGCTGTATTA CGGAAGCAGA CGTTGCCTTG
TGTAAGGGCC TGTTTCATGG TATCAATATC AAACTCACCA AATGTGGTGG TATCACGCCT
GCCCGTCGCA TGATTGCGGA AGCCAAACAA CTGGGTATGC AGGTCATGAC CGGTAGTATG
AATGAAAGTA CGGTGGGTAC TTCTGCGGTA GCACACCTGT TACCGTATCT GGATTATGTG
GATATGGATG GCCCGCTTTT GCTGGCAGAA GACACCGCTG ATGGTGTGAA GATCGTAGAC
GGTCGTATCA TCTATGCTGA CAGGCCCGGT ACCGGCGCCT TATTAAGATA A
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| Protein sequence | MQLTLYPFEL KFKHTFTISR KSKDVQPLLV VKLEQDGFSG LGETADNSYY NMTVPRLMED
INAHRDLIEG YTLDTPEELW KTLFPLFKDN LFALCAIDLA AHDLYAKKQG KKLYEVWGLD
ISHNPMTDYT IGIDTVENMV SKLKEFPWPI YKIKLGTKED IAIIEALRKH TNAIFRVDAN
CAWGVEETLR NAAAFKSLGV EFIEQPMPAA DIDGMKQVYE QSALPLIADE SCITEADVAL
CKGLFHGINI KLTKCGGITP ARRMIAEAKQ LGMQVMTGSM NESTVGTSAV AHLLPYLDYV
DMDGPLLLAE DTADGVKIVD GRIIYADRPG TGALLR
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